Information for 5-CGGAGCGCCC (Motif 11)

G T A C C T A G A T C G G C T A A C T G A G T C A C T G A G T C A T G C A T G C
Reverse Opposite:
A T C G A T C G T C A G G T A C C T A G A G T C C G A T A T G C G A T C C A T G
p-value:1e-9
log p-value:-2.079e+01
Information Content per bp:1.829
Number of Target Sequences with motif26.0
Percentage of Target Sequences with motif3.13%
Number of Background Sequences with motif352.0
Percentage of Background Sequences with motif0.72%
Average Position of motif in Targets54.7 +/- 27.6bp
Average Position of motif in Background50.6 +/- 25.9bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0052.1_Plagl1_1/Jaspar

Match Rank:1
Score:0.75
Offset:-2
Orientation:reverse strand
Alignment:--CGGAGCGCCC----
NNNGGGGCGCCCCCNN
 A C G T A C G T G T A C C T A G A T C G G C T A A C T G A G T C A C T G A G T C A T G C A T G C A C G T A C G T A C G T A C G T
A T G C A G C T T G C A C T A G C A T G C T A G A C T G A T G C A T C G T G A C G A T C G T A C G A T C G A T C C T G A T G C A

POL013.1_MED-1/Jaspar

Match Rank:2
Score:0.72
Offset:0
Orientation:reverse strand
Alignment:CGGAGCGCCC
CGGAGC----
 G T A C C T A G A T C G G C T A A C T G A G T C A C T G A G T C A T G C A T G C
A T G C A C T G A C T G C G T A A C T G A G T C A C G T A C G T A C G T A C G T

PB0009.1_E2F3_1/Jaspar

Match Rank:3
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-CGGAGCGCCC----
ANCGCGCGCCCTTNN
 A C G T G T A C C T A G A T C G G C T A A C T G A G T C A C T G A G T C A T G C A T G C A C G T A C G T A C G T A C G T
C G T A C G A T T A G C C T A G T A G C A T C G A T G C A C T G A G T C A T G C G A T C C G A T G C A T C G T A A G C T

PB0008.1_E2F2_1/Jaspar

Match Rank:4
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-CGGAGCGCCC----
NTCGCGCGCCTTNNN
 A C G T G T A C C T A G A T C G G C T A A C T G A G T C A C T G A G T C A T G C A T G C A C G T A C G T A C G T A C G T
C G T A C G A T A T G C C T A G T A G C A T C G A T G C A C T G A T G C A T G C G A C T C G A T G C A T C G T A A G C T

PB0133.1_Hic1_2/Jaspar

Match Rank:5
Score:0.61
Offset:0
Orientation:forward strand
Alignment:CGGAGCGCCC------
GGGTGTGCCCAAAAGG
 G T A C C T A G A T C G G C T A A C T G A G T C A C T G A G T C A T G C A T G C A C G T A C G T A C G T A C G T A C G T A C G T
C A T G A T C G C A T G C A G T C T A G A C G T C T A G A G T C A G T C G T A C G T C A C G T A C G T A G T C A C T A G T A C G

PB0095.1_Zfp161_1/Jaspar

Match Rank:6
Score:0.59
Offset:0
Orientation:forward strand
Alignment:CGGAGCGCCC------
TGGCGCGCGCGCCTGA
 G T A C C T A G A T C G G C T A A C T G A G T C A C T G A G T C A T G C A T G C A C G T A C G T A C G T A C G T A C G T A C G T
C A G T C T A G C T A G A T G C T C A G G A T C C T A G A G T C C T A G A G T C C T A G G A T C G A T C G A C T C T A G C G T A

POL006.1_BREu/Jaspar

Match Rank:7
Score:0.59
Offset:1
Orientation:forward strand
Alignment:CGGAGCGCCC
-AGCGCGCC-
 G T A C C T A G A T C G G C T A A C T G A G T C A C T G A G T C A T G C A T G C
A C G T T G C A T A C G T A G C T C A G T G A C A C T G A G T C A G T C A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:8
Score:0.58
Offset:2
Orientation:forward strand
Alignment:CGGAGCGCCC
--CAGCC---
 G T A C C T A G A T C G G C T A A C T G A G T C A C T G A G T C A T G C A T G C
A C G T A C G T T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T

GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer

Match Rank:9
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:CGGAGCGCCC---
-GGACCACCCACG
 G T A C C T A G A T C G G C T A A C T G A G T C A C T G A G T C A T G C A T G C A C G T A C G T A C G T
A C G T C T A G A T C G T C G A G T A C A G T C G C T A A T G C G T A C G A T C C G T A T A G C T C A G

REL/MA0101.1/Jaspar

Match Rank:10
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:CGGAGCGCCC-
-GGAAANCCCC
 G T A C C T A G A T C G G C T A A C T G A G T C A C T G A G T C A T G C A T G C A C G T
A C G T A C T G C T A G C G T A C G T A C G T A A C G T G A T C G A T C T A G C T A G C