Information for 3-SCCMCGGRACRTG (Motif 10)

A T C G A G T C A G T C G T A C A G T C A C T G A C T G C T G A C G T A A G T C C T G A A C G T A C T G
Reverse Opposite:
A G T C T C G A A G C T A C T G A C G T A G C T G T A C A G T C A C T G A C T G A C T G A C T G A T G C
p-value:1e-9
log p-value:-2.146e+01
Information Content per bp:1.871
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.72%
Number of Background Sequences with motif5.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets45.0 +/- 19.1bp
Average Position of motif in Background42.1 +/- 18.2bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HES7/MA0822.1/Jaspar

Match Rank:1
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:SCCMCGGRACRTG---
----TGGCACGTGCCA
 A T C G A G T C A G T C G T A C A G T C A C T G A C T G C T G A C G T A A G T C C T G A A C G T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G A C T T A C G C T A G A G T C C G T A A G T C A C T G A G C T C T A G A G T C A G T C C T G A

HES5/MA0821.1/Jaspar

Match Rank:2
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:SCCMCGGRACRTG---
----TGGCACGTGCCG
 A T C G A G T C A G T C G T A C A G T C A C T G A C T G C T G A C G T A A G T C C T G A A C G T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G A C T T C A G T C A G A G T C C T G A A G T C C A T G A G C T A C T G A G T C A G T C C T A G

Hes2/MA0616.1/Jaspar

Match Rank:3
Score:0.59
Offset:1
Orientation:forward strand
Alignment:SCCMCGGRACRTG-
-TAACGACACGTGC
 A T C G A G T C A G T C G T A C A G T C A C T G A C T G C T G A C G T A A G T C C T G A A C G T A C T G A C G T
A C G T A C G T C G T A C G T A T A G C A T C G C T G A G T A C C T G A G T A C C T A G A C G T C T A G G T A C

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:4
Score:0.59
Offset:2
Orientation:forward strand
Alignment:SCCMCGGRACRTG
--CCAGGAACAG-
 A T C G A G T C A G T C G T A C A G T C A C T G A C T G C T G A C G T A A G T C C T G A A C G T A C T G
A C G T A C G T T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G A C G T

ARNT::HIF1A/MA0259.1/Jaspar

Match Rank:5
Score:0.58
Offset:6
Orientation:forward strand
Alignment:SCCMCGGRACRTG-
------GGACGTGC
 A T C G A G T C A G T C G T A C A G T C A C T G A C T G C T G A C G T A A G T C C T G A A C G T A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T A C G A C T G T C G A A G T C A C T G A C G T A C T G T A G C

HEY2/MA0649.1/Jaspar

Match Rank:6
Score:0.58
Offset:5
Orientation:forward strand
Alignment:SCCMCGGRACRTG--
-----GACACGTGCC
 A T C G A G T C A G T C G T A C A G T C A C T G A C T G C T G A C G T A A G T C C T G A A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T A G T C G A T G A C C T G A G T A C T A C G G A C T A T C G A G T C T A G C

EBF(EBF)/proBcell-EBF-ChIP-Seq(GSE21978)/Homer

Match Rank:7
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-SCCMCGGRACRTG
TCCCNNGGGACN--
 A C G T A T C G A G T C A G T C G T A C A G T C A C T G A C T G C T G A C G T A A G T C C T G A A C G T A C T G
G A C T A G T C A G T C A G T C G A C T C T G A A C T G C T A G A C T G C T G A T A G C G A T C A C G T A C G T

HIF2a(bHLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer

Match Rank:8
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:SCCMCGGRACRTG-
----GGGTACGTGC
 A T C G A G T C A G T C G T A C A G T C A C T G A C T G C T G A C G T A A G T C C T G A A C G T A C T G A C G T
A C G T A C G T A C G T A C G T C T A G A T C G T C A G C A G T C T G A A T G C A C T G A G C T A C T G G T A C

PB0147.1_Max_2/Jaspar

Match Rank:9
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--SCCMCGGRACRTG
GTGCCACGCGACTG-
 A C G T A C G T A T C G A G T C A G T C G T A C A G T C A C T G A C T G C T G A C G T A A G T C C T G A A C G T A C T G
A C T G A G C T A C T G G A T C A G T C C G T A A G T C T C A G G A T C A C T G T C G A T G A C C A G T C A T G A C G T

PB0204.1_Zfp740_2/Jaspar

Match Rank:10
Score:0.57
Offset:-6
Orientation:forward strand
Alignment:------SCCMCGGRACRTG
AAATTCCCCCCGGAAGT--
 A C G T A C G T A C G T A C G T A C G T A C G T A T C G A G T C A G T C G T A C A G T C A C T G A C T G C T G A C G T A A G T C C T G A A C G T A C T G
C T G A C T G A C T G A C A G T G C A T G A T C G A T C A G T C A G T C A T G C A T G C T A C G A T C G C T G A C T G A T C A G A G C T A C G T A C G T