Information for 20-TTTTAACAGCACAGTT (Motif 32)

A C G T A C G T A C G T A C G T C G T A C G T A G T A C C T G A A C T G A G T C C G T A A G T C C G T A A T C G A C G T A G C T
Reverse Opposite:
C T G A C G T A A T G C A C G T C T A G A C G T C T A G G T A C A G C T A C T G A C G T A C G T G T C A C G T A C G T A C G T A
p-value:1e-6
log p-value:-1.404e+01
Information Content per bp:1.901
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.63%
Number of Background Sequences with motif5.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets64.0 +/- 24.1bp
Average Position of motif in Background67.9 +/- 29.3bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Rhox11/MA0629.1/Jaspar

Match Rank:1
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--TTTTAACAGCACAGTT
TCNNTTTACAGCGNNNT-
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A G T A C C T G A A C T G A G T C C G T A A G T C C G T A A T C G A C G T A G C T
C G A T A G T C A T C G G A T C C G A T C G A T C G A T C G T A G A T C G C T A A T C G A G T C C T A G A C G T G T A C A C G T G C A T A C G T

PH0157.1_Rhox11_1/Jaspar

Match Rank:2
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--TTTTAACAGCACAGTT
TCNNTTTACAGCGNNNT-
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A G T A C C T G A A C T G A G T C C G T A A G T C C G T A A T C G A C G T A G C T
C G A T A G T C A T C G G A T C C G A T C G A T C G A T C G T A G A T C G C T A A T C G A G T C C T A G A C G T G T A C A C G T G C A T A C G T

PH0158.1_Rhox11_2/Jaspar

Match Rank:3
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--TTTTAACAGCACAGTT
TCNCTTTACAGCGNNNT-
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A G T A C C T G A A C T G A G T C C G T A A G T C C G T A A T C G A C G T A G C T
C G A T A G T C A T G C G A T C C G A T C G A T C G A T C G T A G A T C G C T A A T C G G A T C C T A G C A G T G T A C A G T C C G A T A C G T

HOXC13/MA0907.1/Jaspar

Match Rank:4
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-TTTTAACAGCACAGTT
NTTTTACGAGN------
 A C G T A C G T A C G T A C G T A C G T C G T A C G T A G T A C C T G A A C T G A G T C C G T A A G T C C G T A A T C G A C G T A G C T
C G A T C G A T C G A T C G A T G C A T G T C A A G T C C T A G T C G A A T C G T G A C A C G T A C G T A C G T A C G T A C G T A C G T

PH0068.1_Hoxc13/Jaspar

Match Rank:5
Score:0.52
Offset:-3
Orientation:reverse strand
Alignment:---TTTTAACAGCACAGTT
NAATTTTACGAGNTNN---
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A G T A C C T G A A C T G A G T C C G T A A G T C C G T A A T C G A C G T A G C T
G C T A C T G A C G T A C G A T C G A T C G A T C G A T C T G A G A T C C T A G C T G A A T C G T G A C C G A T C G A T C G A T A C G T A C G T A C G T

Unknown(Homeobox)/Limb-p300-ChIP-Seq/Homer

Match Rank:6
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:TTTTAACAGCACAGTT
-TTTAATTGCN-----
 A C G T A C G T A C G T A C G T C G T A C G T A G T A C C T G A A C T G A G T C C G T A A G T C C G T A A T C G A C G T A G C T
A C G T C G A T A G C T C G A T G C T A C G T A G A C T C A G T C T A G T A G C A T G C A C G T A C G T A C G T A C G T A C G T

HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer

Match Rank:7
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:TTTTAACAGCACAGTT
TTTTATTRGN------
 A C G T A C G T A C G T A C G T C G T A C G T A G T A C C T G A A C T G A G T C C G T A A G T C C G T A A T C G A C G T A G C T
C G A T A C G T A C G T C G A T C G T A G C A T C A G T C T G A A T C G G C T A A C G T A C G T A C G T A C G T A C G T A C G T

PH0170.1_Tgif2/Jaspar

Match Rank:8
Score:0.51
Offset:-1
Orientation:reverse strand
Alignment:-TTTTAACAGCACAGTT
GTATTGACAGCTNNTT-
 A C G T A C G T A C G T A C G T A C G T C G T A C G T A G T A C C T G A A C T G A G T C C G T A A G T C C G T A A T C G A C G T A G C T
A C T G A C G T C G T A C G A T C G A T A C T G C G T A A G T C C T G A C A T G T A G C G A C T T C G A T A C G G C A T C G A T A C G T

LIN54/MA0619.1/Jaspar

Match Rank:9
Score:0.51
Offset:-1
Orientation:forward strand
Alignment:-TTTTAACAGCACAGTT
ATTTGAATT--------
 A C G T A C G T A C G T A C G T A C G T C G T A C G T A G T A C C T G A A C T G A G T C C G T A A G T C C G T A A T C G A C G T A G C T
C G T A A C G T A C G T A G C T C T A G C G T A C G T A G A C T G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PH0169.1_Tgif1/Jaspar

Match Rank:10
Score:0.50
Offset:-2
Orientation:forward strand
Alignment:--TTTTAACAGCACAGTT
GATATTGACAGCTGCGT-
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A G T A C C T G A A C T G A G T C C G T A A G T C C G T A A T C G A C G T A G C T
C A G T C T G A A C G T C G T A C G A T C G A T A C T G C G T A A G T C C T G A C T A G A T G C A C G T T A C G T A G C A C T G C G A T A C G T