Information for 7-GAGCMAARWTTYC (Motif 14)

A C T G C G T A A C T G A G T C G T A C C G T A C G T A C T A G C G A T A C G T A C G T A G T C G T A C
Reverse Opposite:
A C T G C T A G C G T A C G T A C G T A A G T C C G A T A C G T A C T G A C T G A G T C A C G T A G T C
p-value:1e-9
log p-value:-2.291e+01
Information Content per bp:1.873
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.79%
Number of Background Sequences with motif2.1
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets59.0 +/- 26.1bp
Average Position of motif in Background54.3 +/- 8.2bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFIX/MA0671.1/Jaspar

Match Rank:1
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-GAGCMAARWTTYC
CGTGCCAAG-----
 A C G T A C T G C G T A A C T G A G T C G T A C C G T A C G T A C T A G C G A T A C G T A C G T A G T C G T A C
T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T A C G T A C G T A C G T A C G T

NFIC/MA0161.1/Jaspar

Match Rank:2
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:GAGCMAARWTTYC
-TGCCAA------
 A C T G C G T A A C T G A G T C G T A C C G T A C G T A C T A G C G A T A C G T A C G T A G T C G T A C
A C G T G C A T C A T G G A T C A G T C G T C A C T G A A C G T A C G T A C G T A C G T A C G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:3
Score:0.56
Offset:0
Orientation:forward strand
Alignment:GAGCMAARWTTYC
CAGCC--------
 A C T G C G T A A C T G A G T C G T A C C G T A C G T A C T A G C G A T A C G T A C G T A G T C G T A C
T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NFIA/MA0670.1/Jaspar

Match Rank:4
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-GAGCMAARWTTYC
GGTGCCAAGT----
 A C G T A C T G C G T A A C T G A G T C G T A C C G T A C G T A C T A G C G A T A C G T A C G T A G T C G T A C
T C A G C A T G A C G T A C T G A G T C A G T C C G T A C G T A T C A G C G A T A C G T A C G T A C G T A C G T

NFAT:AP1(RHD,bZIP)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:5
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--GAGCMAARWTTYC-----
NTGACTCANTTTTTCCANTN
 A C G T A C G T A C T G C G T A A C T G A G T C G T A C C G T A C G T A C T A G C G A T A C G T A C G T A G T C G T A C A C G T A C G T A C G T A C G T A C G T
T C G A G C A T A C T G C G T A A T G C G C A T G T A C C G T A A G C T G C A T A G C T A G C T G A C T A G C T A G T C A G T C G C T A A G C T G A C T A T G C

POL013.1_MED-1/Jaspar

Match Rank:6
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--GAGCMAARWTTYC
CGGAGC---------
 A C G T A C G T A C T G C G T A A C T G A G T C G T A C C G T A C G T A C T A G C G A T A C G T A C G T A G T C G T A C
A T G C A C T G A C T G C G T A A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NFATC1/MA0624.1/Jaspar

Match Rank:7
Score:0.54
Offset:6
Orientation:forward strand
Alignment:GAGCMAARWTTYC---
------ATTTTCCATT
 A C T G C G T A A C T G A G T C G T A C C G T A C G T A C T A G C G A T A C G T A C G T A G T C G T A C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C G T A G C A T C G A T G A C T G A C T T G A C G A T C C T G A G A C T G C A T

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:8
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:GAGCMAARWTTYC
--GCAGTGATTT-
 A C T G C G T A A C T G A G T C G T A C C G T A C G T A C T A G C G A T A C G T A C G T A G T C G T A C
A C G T A C G T C T A G A G T C G C T A A T C G C G A T A C T G T C G A A C G T A C G T A C G T A C G T

Nr2e3/MA0164.1/Jaspar

Match Rank:9
Score:0.53
Offset:4
Orientation:forward strand
Alignment:GAGCMAARWTTYC
----CAAGCTT--
 A C T G C G T A A C T G A G T C G T A C C G T A C G T A C T A G C G A T A C G T A C G T A G T C G T A C
A C G T A C G T A C G T A C G T G A T C C G T A C G T A A T C G A G T C A C G T A C G T A C G T A C G T

NFATC3/MA0625.1/Jaspar

Match Rank:10
Score:0.53
Offset:6
Orientation:forward strand
Alignment:GAGCMAARWTTYC---
------ATTTTCCATT
 A C T G C G T A A C T G A G T C G T A C C G T A C G T A C T A G C G A T A C G T A C G T A G T C G T A C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C G T A G A C T C G A T G C A T A G C T G T A C A T G C C T G A G A C T G C A T