Information for 7-GCATGCACCGCCC (Motif 4)

A C T G A G T C C G T A A C G T T A C G A G T C C G T A T A G C A G T C A C T G A G T C A G T C A T G C
Reverse Opposite:
A T C G T C A G A C T G A G T C T C A G A T C G A C G T A C T G A G T C T G C A A C G T A C T G G T A C
p-value:1e-19
log p-value:-4.495e+01
Information Content per bp:1.796
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif1.83%
Number of Background Sequences with motif22.1
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets35.3 +/- 21.4bp
Average Position of motif in Background62.3 +/- 39.7bp
Strand Bias (log2 ratio + to - strand density)1.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:1
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--GCATGCACCGCCC
TBGCACGCAA-----
 A C G T A C G T A C T G A G T C C G T A A C G T T A C G A G T C C G T A T A G C A G T C A C T G A G T C A G T C A T G C
G C A T A T C G C A T G G T A C G C T A A G T C T C A G T G A C G T C A T G C A A C G T A C G T A C G T A C G T A C G T

PB0091.1_Zbtb3_1/Jaspar

Match Rank:2
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--GCATGCACCGCCC--
NNNANTGCAGTGCNNTT
 A C G T A C G T A C T G A G T C C G T A A C G T T A C G A G T C C G T A T A G C A G T C A C T G A G T C A G T C A T G C A C G T A C G T
T G A C T A C G T A C G T G C A T C G A A C G T T A C G G T A C C G T A A T C G A G C T C A T G T A G C T A C G T C G A G A C T G A C T

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:3
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:GCATGCACCGCCC---
----GCTCCGCCCMCY
 A C T G A G T C C G T A A C G T T A C G A G T C C G T A T A G C A G T C A C T G A G T C A G T C A T G C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T A G A G T C G A C T G T A C A T G C C T A G A G T C A G T C A G T C G T C A A G T C G A C T

Sp1(Zf)/Promoter/Homer

Match Rank:4
Score:0.57
Offset:3
Orientation:forward strand
Alignment:GCATGCACCGCCC--
---GGCCCCGCCCCC
 A C T G A G T C C G T A A C G T T A C G A G T C C G T A T A G C A G T C A C T G A G T C A G T C A T G C A C G T A C G T
A C G T A C G T A C G T T A C G C T A G A T G C G A T C G T A C A G T C C T A G A G T C A G T C A G T C G T A C A G T C

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:5
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:GCATGCACCGCCC
-CACGCA------
 A C T G A G T C C G T A A C G T T A C G A G T C C G T A T A G C A G T C A C T G A G T C A G T C A T G C
A C G T A G T C C G T A G T A C C T A G G T A C C T G A A C G T A C G T A C G T A C G T A C G T A C G T

POL003.1_GC-box/Jaspar

Match Rank:6
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:GCATGCACCGCCC---
--NAGCCCCGCCCCCN
 A C T G A G T C C G T A A C G T T A C G A G T C C G T A T A G C A G T C A C T G A G T C A G T C A T G C A C G T A C G T A C G T
A C G T A C G T G T A C T C G A T C A G G T A C G A T C T G A C G A T C C A T G A G T C A G T C A G T C G T A C G A T C G C A T

PB0207.1_Zic3_2/Jaspar

Match Rank:7
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--GCATGCACCGCCC
NNTCCTGCTGTGNNN
 A C G T A C G T A C T G A G T C C G T A A C G T T A C G A G T C C G T A T A G C A G T C A C T G A G T C A G T C A T G C
G C A T A T C G C A G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G G A C T A C T G G A T C G C A T G T A C

Ddit3::Cebpa/MA0019.1/Jaspar

Match Rank:8
Score:0.55
Offset:0
Orientation:forward strand
Alignment:GCATGCACCGCCC
AGATGCAATCCC-
 A C T G A G T C C G T A A C G T T A C G A G T C C G T A T A G C A G T C A C T G A G T C A G T C A T G C
T C G A C T A G C T G A A G C T A C T G G T A C G T C A T G C A A G C T T G A C T A G C A G T C A C G T

Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer

Match Rank:9
Score:0.55
Offset:-4
Orientation:reverse strand
Alignment:----GCATGCACCGCCC
ATTTGCATACAATGG--
 A C G T A C G T A C G T A C G T A C T G A G T C C G T A A C G T T A C G A G T C C G T A T A G C A G T C A C T G A G T C A G T C A T G C
G T C A A G C T G A C T C G A T T C A G T G A C C G T A G A C T C G T A A T G C C G T A C G T A C G A T C T A G T C A G A C G T A C G T

PB0099.1_Zfp691_1/Jaspar

Match Rank:10
Score:0.55
Offset:1
Orientation:forward strand
Alignment:GCATGCACCGCCC-----
-CGAACAGTGCTCACTAT
 A C T G A G T C C G T A A C G T T A C G A G T C C G T A T A G C A G T C A C T G A G T C A G T C A T G C A C G T A C G T A C G T A C G T A C G T
A C G T A G T C C A T G G C T A T C G A G A T C T C G A A C T G C G A T C T A G G T A C A G C T A G T C T G C A A G T C G C A T C T G A C G A T