Information for 6-TTGTAGTTCCMMS (Motif 3)

A C G T A C G T A C T G A C G T C G T A A C T G A C G T A C G T A G T C A G T C G T A C T G A C A T G C
Reverse Opposite:
A T C G A C G T A C T G A C T G C T A G G T C A C G T A A G T C A C G T C G T A A G T C C G T A C G T A
p-value:1e-20
log p-value:-4.723e+01
Information Content per bp:1.890
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif1.61%
Number of Background Sequences with motif11.5
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets67.7 +/- 30.1bp
Average Position of motif in Background74.4 +/- 4.5bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0115.1_Ehf_2/Jaspar

Match Rank:1
Score:0.64
Offset:0
Orientation:forward strand
Alignment:TTGTAGTTCCMMS---
TAGTATTTCCGATCTT
 A C G T A C G T A C T G A C G T C G T A A C T G A C G T A C G T A G T C A G T C G T A C T G A C A T G C A C G T A C G T A C G T
C G A T C G T A T C A G C A G T C T G A A C G T C G A T C G A T G A T C G A T C A C T G G C T A G C A T T A G C C G A T G C A T

ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:TTGTAGTTCCMMS
-TKCTGTTCCA--
 A C G T A C G T A C T G A C G T C G T A A C T G A C G T A C G T A G T C A G T C G T A C T G A C A T G C
A C G T A C G T C A G T T A G C A G C T T A C G C G A T A C G T A G T C G T A C G T C A A C G T A C G T

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:3
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-TTGTAGTTCCMMS
NNTGTGGTTT----
 A C G T A C G T A C G T A C T G A C G T C G T A A C T G A C G T A C G T A G T C A G T C G T A C T G A C A T G C
A C G T G A C T C A G T A C T G G A C T A C T G A C T G A G C T A G C T C G A T A C G T A C G T A C G T A C G T

CTCF-SatelliteElement(Zf?)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:4
Score:0.60
Offset:1
Orientation:forward strand
Alignment:TTGTAGTTCCMMS--------
-TGCAGTTCCNNNNNTGGCCA
 A C G T A C G T A C T G A C G T C G T A A C T G A C G T A C G T A G T C A G T C G T A C T G A C A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C G A T T A C G G A T C G C T A T C A G G A C T C G A T G T A C G A T C G T C A T C G A T G A C C G T A C T A G G A C T C T A G C T A G G T A C A G T C C G T A

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:5
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:TTGTAGTTCCMMS
CTGTGGTTTN---
 A C G T A C G T A C T G A C G T C G T A A C T G A C G T A C G T A G T C A G T C G T A C T G A C A T G C
G A T C A C G T A C T G A G C T A C T G A C T G A G C T A G C T C G A T A T C G A C G T A C G T A C G T

PU.1:IRF8(ETS:IRF)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer

Match Rank:6
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--TTGTAGTTCCMMS
ASTTTCACTTCC---
 A C G T A C G T A C G T A C G T A C T G A C G T C G T A A C T G A C G T A C G T A G T C A G T C G T A C T G A C A T G C
C T G A A T G C G C A T G A C T G A C T A G T C G C T A A T G C G C A T C G A T A G T C G A T C A C G T A C G T A C G T

PB0058.1_Sfpi1_1/Jaspar

Match Rank:7
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:TTGTAGTTCCMMS---
--NNACTTCCTCTTNN
 A C G T A C G T A C T G A C G T C G T A A C T G A C G T A C G T A G T C A G T C G T A C T G A C A T G C A C G T A C G T A C G T
A C G T A C G T C A G T G C T A C T G A A T G C C G A T C G A T A G T C A G T C A C G T A G T C G C A T G C A T G C T A T C G A

GFY(?)/Promoter/Homer

Match Rank:8
Score:0.58
Offset:-5
Orientation:reverse strand
Alignment:-----TTGTAGTTCCMMS
GGGAATTGTAGT------
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T C G T A A C T G A C G T A C G T A G T C A G T C G T A C T G A C A T G C
C A T G T C A G T C A G T C G A T C G A G C A T A C G T A C T G A C G T C T G A A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:9
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--TTGTAGTTCCMMS
NNHTGTGGTTWN---
 A C G T A C G T A C G T A C G T A C T G A C G T C G T A A C T G A C G T A C G T A G T C A G T C G T A C T G A C A T G C
C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G A C G T A C G T A C G T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:10
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-TTGTAGTTCCMMS
GCTGTGGTTT----
 A C G T A C G T A C G T A C T G A C G T C G T A A C T G A C G T A C G T A G T C A G T C G T A C T G A C A T G C
A C T G G A T C G A C T A C T G A C G T C A T G A C T G A C G T A G C T C G A T A C G T A C G T A C G T A C G T