Information for 20-GTTTGCGAGATTT (Motif 23)

C T A G A C G T A C G T A C G T A T C G A G T C A C T G C G T A A C T G C G T A C G A T A C G T A C G T
Reverse Opposite:
C G T A G T C A C G T A A C G T A G T C A C G T A G T C A C T G A T G C C G T A C G T A C G T A A G T C
p-value:1e-5
log p-value:-1.160e+01
Information Content per bp:1.932
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.34%
Number of Background Sequences with motif2.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets60.0 +/- 26.6bp
Average Position of motif in Background61.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.67
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0048.1_Hoxa13/Jaspar

Match Rank:1
Score:0.67
Offset:-3
Orientation:reverse strand
Alignment:---GTTTGCGAGATTT
ANATTTTACGAGNNNN
 A C G T A C G T A C G T C T A G A C G T A C G T A C G T A T C G A G T C A C T G C G T A A C T G C G T A C G A T A C G T A C G T
G C T A T C G A C G T A C G A T C A G T C G A T C G A T C T G A A G T C C T A G C T G A A T C G T A C G C G A T G C A T C G A T

PH0068.1_Hoxc13/Jaspar

Match Rank:2
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---GTTTGCGAGATTT
NAATTTTACGAGNTNN
 A C G T A C G T A C G T C T A G A C G T A C G T A C G T A T C G A G T C A C T G C G T A A C T G C G T A C G A T A C G T A C G T
G C T A C T G A C G T A C G A T C G A T C G A T C G A T C T G A G A T C C T A G C T G A A T C G T G A C C G A T C G A T C G A T

HOXC13/MA0907.1/Jaspar

Match Rank:3
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-GTTTGCGAGATTT
NTTTTACGAGN---
 A C G T C T A G A C G T A C G T A C G T A T C G A G T C A C T G C G T A A C T G C G T A C G A T A C G T A C G T
C G A T C G A T C G A T C G A T G C A T G T C A A G T C C T A G T C G A A T C G T G A C A C G T A C G T A C G T

PB0139.1_Irf5_2/Jaspar

Match Rank:4
Score:0.61
Offset:0
Orientation:forward strand
Alignment:GTTTGCGAGATTT--
TTGACCGAGAATTCC
 C T A G A C G T A C G T A C G T A T C G A G T C A C T G C G T A A C T G C G T A C G A T A C G T A C G T A C G T A C G T
A G C T G C A T C T A G C G T A G A C T G T A C C T A G C T G A A T C G C G T A C T G A G A C T G A C T A G T C T A G C

PB0138.1_Irf4_2/Jaspar

Match Rank:5
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:GTTTGCGAGATTT--
GNNACCGAGAATNNN
 C T A G A C G T A C G T A C G T A T C G A G T C A C T G C G T A A C T G C G T A C G A T A C G T A C G T A C G T A C G T
A T C G G T A C C T G A G C T A A G T C A G T C C A T G T C G A C A T G G C T A C T G A C G A T T C G A A T G C A G C T

PB0075.1_Sp100_1/Jaspar

Match Rank:6
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-GTTTGCGAGATTT
ATTTTCCGNNAAAT
 A C G T C T A G A C G T A C G T A C G T A T C G A G T C A C T G C G T A A C T G C G T A C G A T A C G T A C G T
G T C A C G A T C G A T G C A T C A G T G T A C A T G C A T C G C A G T C T G A C G T A G C T A G C T A A G C T

PH0066.1_Hoxc11/Jaspar

Match Rank:7
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---GTTTGCGAGATTT
NNNTTTTACGACNTTN
 A C G T A C G T A C G T C T A G A C G T A C G T A C G T A T C G A G T C A C T G C G T A A C T G C G T A C G A T A C G T A C G T
G T A C G A C T C T G A C G A T C G A T C G A T C G A T C G T A A G T C C A T G C T G A A G T C G A C T C G A T G A C T C T G A

Gfi1/MA0038.1/Jaspar

Match Rank:8
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:GTTTGCGAGATTT-
----CNGTGATTTN
 C T A G A C G T A C G T A C G T A T C G A G T C A C T G C G T A A C T G C G T A C G A T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A T G C C G T A A T C G C G A T A C T G G C T A A C G T A C G T A C G T C T A G

PH0047.1_Hoxa11/Jaspar

Match Rank:9
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---GTTTGCGAGATTT
NNGTTTTACGACTTTA
 A C G T A C G T A C G T C T A G A C G T A C G T A C G T A T C G A G T C A C T G C G T A A C T G C G T A C G A T A C G T A C G T
G T C A G A C T C T A G C G A T C A G T C G A T C G A T C G T A A G T C C A T G C T G A A G T C G A C T C G A T G A C T C G T A

PB0162.1_Sfpi1_2/Jaspar

Match Rank:10
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:GTTTGCGAGATTT-
GGTTCCNNAATTTG
 C T A G A C G T A C G T A C G T A T C G A G T C A C T G C G T A A C T G C G T A C G A T A C G T A C G T A C G T
C A T G A C T G C G A T G C A T A G T C A G T C A C T G C A T G G C T A C G T A C G A T G A C T C A G T C A T G