Information for 9-CCGCTCCCAT (Motif 20)

G A T C A T G C A C T G A G T C A C G T G T A C A T G C A G T C C G T A A C G T
Reverse Opposite:
C G T A C G A T A C T G A T C G A C T G C G T A C T A G A G T C A T C G C T A G
p-value:1e-7
log p-value:-1.638e+01
Information Content per bp:1.854
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.26%
Number of Background Sequences with motif64.5
Percentage of Background Sequences with motif0.14%
Average Position of motif in Targets52.4 +/- 26.6bp
Average Position of motif in Background55.1 +/- 36.2bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.09
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL013.1_MED-1/Jaspar

Match Rank:1
Score:0.68
Offset:2
Orientation:forward strand
Alignment:CCGCTCCCAT
--GCTCCG--
 G A T C A T G C A C T G A G T C A C G T G T A C A T G C A G T C C G T A A C G T
A C G T A C G T A C T G A G T C A C G T A G T C A G T C A T C G A C G T A C G T

PB0076.1_Sp4_1/Jaspar

Match Rank:2
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----CCGCTCCCAT---
GGTCCCGCCCCCTTCTC
 A C G T A C G T A C G T A C G T G A T C A T G C A C T G A G T C A C G T G T A C A T G C A G T C C G T A A C G T A C G T A C G T A C G T
A C T G C A T G G A C T G T A C G T A C A G T C C T A G A G T C A T G C A G T C G T A C A G T C G A C T G A C T T A G C A G C T A G T C

PB0098.1_Zfp410_1/Jaspar

Match Rank:3
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---CCGCTCCCAT----
NNNTCCATCCCATAANN
 A C G T A C G T A C G T G A T C A T G C A C T G A G T C A C G T G T A C A T G C A G T C C G T A A C G T A C G T A C G T A C G T A C G T
A C G T G C A T G T C A A C G T T G A C G A T C G C T A A G C T G A T C G A T C G A T C C G T A C A G T G C T A G T C A A G C T G C T A

KLF5/MA0599.1/Jaspar

Match Rank:4
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-CCGCTCCCAT
GCCCCGCCCC-
 A C G T G A T C A T G C A C T G A G T C A C G T G T A C A T G C A G T C C G T A A C G T
A C T G A G T C A G T C G T A C A G T C C T A G A G T C A G T C A G T C G A T C A C G T

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:5
Score:0.60
Offset:1
Orientation:forward strand
Alignment:CCGCTCCCAT-
-HTTTCCCASG
 G A T C A T G C A C T G A G T C A C G T G T A C A T G C A G T C C G T A A C G T A C G T
A C G T G A C T C A G T A G C T C G A T A G T C G A T C A G T C C G T A A T G C T C A G

Klf4/MA0039.2/Jaspar

Match Rank:6
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-CCGCTCCCAT
GCCCCACCCA-
 A C G T G A T C A T G C A C T G A G T C A C G T G T A C A T G C A G T C C G T A A C G T
T C A G T G A C G A T C T G A C G T A C C T G A T A G C A G T C A G T C G C T A A C G T

Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer

Match Rank:7
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-CCGCTCCCAT
GCCACACCCA-
 A C G T G A T C A T G C A C T G A G T C A C G T G T A C A T G C A G T C C G T A A C G T
C T A G G T A C A G T C T G C A A G T C C T G A A G T C A G T C A G T C G C T A A C G T

PB0039.1_Klf7_1/Jaspar

Match Rank:8
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----CCGCTCCCAT--
TCGACCCCGCCCCTAT
 A C G T A C G T A C G T A C G T G A T C A T G C A C T G A G T C A C G T G T A C A T G C A G T C C G T A A C G T A C G T A C G T
G A C T A G T C C T A G T C G A G T A C G T A C T G A C G A T C C T A G A G T C A G T C A G T C G A T C G A C T G C T A C G A T

POL010.1_DCE_S_III/Jaspar

Match Rank:9
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:CCGCTCCCAT
-NGCTN----
 G A T C A T G C A C T G A G T C A C G T G T A C A T G C A G T C C G T A A C G T
A C G T T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T A C G T

Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:CCGCTCCCAT
CCCCCCCC--
 G A T C A T G C A C T G A G T C A C G T G T A C A T G C A G T C C G T A A C G T
A G T C A G T C A T G C A G T C A G T C G A T C A G T C A G T C A C G T A C G T