Information for 2-GKGCMTGCTGGGA (Motif 2)

A T C G C A G T C T A G T A G C G T C A A G C T A C T G G A T C A G C T A T C G C T A G C T A G T C G A
Reverse Opposite:
A G C T A G T C G A T C A T G C C T G A C A T G T G A C T C G A C A G T A T C G A G T C G T C A T A G C
p-value:1e-135
log p-value:-3.121e+02
Information Content per bp:1.679
Number of Target Sequences with motif169.0
Percentage of Target Sequences with motif19.38%
Number of Background Sequences with motif610.9
Percentage of Background Sequences with motif1.35%
Average Position of motif in Targets44.3 +/- 27.4bp
Average Position of motif in Background50.8 +/- 27.6bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer

Match Rank:1
Score:0.90
Offset:1
Orientation:reverse strand
Alignment:GKGCMTGCTGGGA---
-RGSMTBCTGGGAAAT
 A T C G C A G T C T A G T A G C G T C A A G C T A C T G G A T C A G C T A T C G C T A G C T A G T C G A A C G T A C G T A C G T
A C G T C T A G A C T G T A G C G T C A A G C T A G C T T G A C G A C T A C T G A C T G A C T G C G T A T C G A C G T A A C G T

PB0206.1_Zic2_2/Jaspar

Match Rank:2
Score:0.72
Offset:0
Orientation:reverse strand
Alignment:GKGCMTGCTGGGA--
TCNCCTGCTGNGNNN
 A T C G C A G T C T A G T A G C G T C A A G C T A C T G G A T C A G C T A T C G C T A G C T A G T C G A A C G T A C G T
G C A T A G T C A C G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G A C T C A T G C T A G

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:3
Score:0.71
Offset:3
Orientation:forward strand
Alignment:GKGCMTGCTGGGA
---CCTGCTGAGH
 A T C G C A G T C T A G T A G C G T C A A G C T A C T G G A T C A G C T A T C G C T A G C T A G T C G A
A C G T A C G T A C G T A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A

PB0205.1_Zic1_2/Jaspar

Match Rank:4
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:GKGCMTGCTGGGA--
TNTCCTGCTGTGNNG
 A T C G C A G T C T A G T A G C G T C A A G C T A C T G G A T C A G C T A T C G C T A G C T A G T C G A A C G T A C G T
G C A T A G T C C A G T T G A C G T A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G C A T C A T G T C A G

ZNF143/MA0088.2/Jaspar

Match Rank:5
Score:0.70
Offset:-2
Orientation:reverse strand
Alignment:--GKGCMTGCTGGGA-
CAATGCATTGTGGGTA
 A C G T A C G T A T C G C A G T C T A G T A G C G T C A A G C T A C T G G A T C A G C T A T C G C T A G C T A G T C G A A C G T
G A T C C T G A C T G A C A G T A C T G A G T C G C T A G A C T A G C T T C A G G A C T A C T G A C T G A C T G G C A T T C G A

PB0207.1_Zic3_2/Jaspar

Match Rank:6
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:GKGCMTGCTGGGA--
NNTCCTGCTGTGNNN
 A T C G C A G T C T A G T A G C G T C A A G C T A C T G G A T C A G C T A T C G C T A G C T A G T C G A A C G T A C G T
G C A T A T C G C A G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G G A C T A C T G G A T C G C A T G T A C

GFY-Staf(?,Zf)/Promoter/Homer

Match Rank:7
Score:0.69
Offset:2
Orientation:reverse strand
Alignment:GKGCMTGCTGGGA---------
--GCATTCTGGGAATTGTAGTT
 A T C G C A G T C T A G T A G C G T C A A G C T A C T G G A T C A G C T A T C G C T A G C T A G T C G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T T C A G T A G C G T C A A G C T A C G T A G T C A G C T A C T G A C T G C T A G C G T A C T G A C G A T A G C T A C T G A C G T C T G A A C T G A C G T A G C T

STAT3/MA0144.2/Jaspar

Match Rank:8
Score:0.68
Offset:4
Orientation:forward strand
Alignment:GKGCMTGCTGGGA--
----CTTCTGGGAAA
 A T C G C A G T C T A G T A G C G T C A A G C T A C T G G A T C A G C T A T C G C T A G C T A G T C G A A C G T A C G T
A C G T A C G T A C G T A C G T A G T C C G A T A C G T G A T C G A C T C A T G C T A G C T A G C G T A C G T A C T G A

Ronin(THAP)/ES-Thap11-ChIP-Seq(GSE51522)/Homer

Match Rank:9
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:GKGCMTGCTGGGA---------
--GCMTBCTGGGAGTTGTAGTY
 A T C G C A G T C T A G T A G C G T C A A G C T A C T G G A T C A G C T A T C G C T A G C T A G T C G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C A T G T A G C G T A C A G C T A C G T T G A C A G C T C T A G A C T G C T A G C G T A T C A G G C A T A G C T A C T G C G A T C T G A A C T G A C G T A G T C

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:10
Score:0.64
Offset:4
Orientation:forward strand
Alignment:GKGCMTGCTGGGA-
----WDNCTGGGCA
 A T C G C A G T C T A G T A G C G T C A A G C T A C T G G A T C A G C T A T C G C T A G C T A G T C G A A C G T
A C G T A C G T A C G T A C G T G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A