Information for 17-CARYCACACGAMM (Motif 15)

A G T C C G T A C T A G A G T C A G T C G T C A A G T C C T G A A G T C A C T G C G T A G T A C G T A C
Reverse Opposite:
A C T G A C T G A C G T A G T C C T A G A G C T A C T G A C G T A C T G C T A G A G T C A C G T A C T G
p-value:1e-9
log p-value:-2.112e+01
Information Content per bp:1.867
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.57%
Number of Background Sequences with motif2.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets62.7 +/- 26.5bp
Average Position of motif in Background60.5 +/- 11.8bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.40
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer

Match Rank:1
Score:0.69
Offset:2
Orientation:reverse strand
Alignment:CARYCACACGAMM
--GTCACATGAY-
 A G T C C G T A C T A G A G T C A G T C G T C A A G T C C T G A A G T C A C T G C G T A G T A C G T A C
A C G T A C G T T C A G G A C T G T A C G T C A A G T C T C G A G C A T A T C G T C G A A G T C A C G T

USF2/MA0526.1/Jaspar

Match Rank:2
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:CARYCACACGAMM
-GGTCACATGAC-
 A G T C C G T A C T A G A G T C A G T C G T C A A G T C C T G A A G T C A C T G C G T A G T A C G T A C
A C G T C T A G T C A G A G C T A G T C C G T A A G T C T C G A A C G T A C T G T C G A A G T C A C G T

TFEC/MA0871.1/Jaspar

Match Rank:3
Score:0.62
Offset:2
Orientation:forward strand
Alignment:CARYCACACGAMM
--ATCACGTGAC-
 A G T C C G T A C T A G A G T C A G T C G T C A A G T C C T G A A G T C A C T G C G T A G T A C G T A C
A C G T A C G T T C G A C A G T G T A C C G T A A G T C T C A G G A C T A C T G T C G A A G T C A C G T

PB0208.1_Zscan4_2/Jaspar

Match Rank:4
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-CARYCACACGAMM--
CGAAGCACACAAAATA
 A C G T A G T C C G T A C T A G A G T C A G T C G T C A A G T C C T G A A G T C A C T G C G T A G T A C G T A C A C G T A C G T
G T A C T A C G G C T A T C G A C T A G T G A C C G T A G T A C C T G A G A T C G C T A G T C A G T C A G C T A G C A T T C G A

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:5
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-CARYCACACGAMM
NWAACCACADNN--
 A C G T A G T C C G T A C T A G A G T C A G T C G T C A A G T C C T G A A G T C A C T G C G T A G T A C G T A C
T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C A C G T A C G T

Srebp2(bHLH)/HepG2-Srebp2-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.61
Offset:0
Orientation:forward strand
Alignment:CARYCACACGAMM
CNGTCACGCCAC-
 A G T C C G T A C T A G A G T C A G T C G T C A A G T C C T G A A G T C A C T G C G T A G T A C G T A C
G T A C C T A G T C A G A G C T T A G C C G T A A T G C T A C G A G T C G T A C G T C A A G T C A C G T

TFEB/MA0692.1/Jaspar

Match Rank:7
Score:0.60
Offset:2
Orientation:forward strand
Alignment:CARYCACACGAMM
--ATCACGTGAC-
 A G T C C G T A C T A G A G T C A G T C G T C A A G T C C T G A A G T C A C T G C G T A G T A C G T A C
A C G T A C G T T C G A A G C T G T A C G T C A A G T C T C A G G C A T A C T G T G C A A G T C A C G T

RUNX1/MA0002.2/Jaspar

Match Rank:8
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:CARYCACACGAMM
AAACCACAGAN--
 A G T C C G T A C T A G A G T C A G T C G T C A A G T C C T G A A G T C A C T G C G T A G T A C G T A C
G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C A C G T A C G T

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:9
Score:0.60
Offset:0
Orientation:forward strand
Alignment:CARYCACACGAMM
AAACCACANN---
 A G T C C G T A C T A G A G T C A G T C G T C A A G T C C T G A A G T C A C T G C G T A G T A C G T A C
G C T A C T G A T C G A A G T C A G T C C T G A A G T C G T C A C T G A T G C A A C G T A C G T A C G T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:10
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-CARYCACACGAMM
NAAACCACAG----
 A C G T A G T C C G T A C T A G A G T C A G T C G T C A A G T C C T G A A G T C A C T G C G T A G T A C G T A C
T A G C G C T A T C G A C T G A A G T C A G T C C T G A A G T C C G T A C T A G A C G T A C G T A C G T A C G T