Information for 5-AGTCGTTGTAGCTGAG (Motif 13)

C G T A A C T G A C G T G T A C A C T G A C G T C G A T A C T G C G A T G T C A A C T G A T G C A C G T C T A G G T C A A C T G
Reverse Opposite:
A G T C A C G T A G T C G T C A A T C G A G T C A C G T C G T A A G T C C G T A C G T A A G T C A C T G G T C A A G T C A C G T
p-value:1e-10
log p-value:-2.457e+01
Information Content per bp:1.906
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.57%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets41.0 +/- 22.1bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SOX10/MA0442.1/Jaspar

Match Rank:1
Score:0.50
Offset:3
Orientation:forward strand
Alignment:AGTCGTTGTAGCTGAG
---CTTTGT-------
 C G T A A C T G A C G T G T A C A C T G A C G T C G A T A C T G C G A T G T C A A C T G A T G C A C G T C T A G G T C A A C T G
A C G T A C G T A C G T A G T C C G A T A C G T A C G T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0136.1_IRC900814_2/Jaspar

Match Rank:2
Score:0.49
Offset:-6
Orientation:forward strand
Alignment:------AGTCGTTGTAGCTGAG
ATGGAAAGTCGTAAAA------
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G A C G T G T A C A C T G A C G T C G A T A C T G C G A T G T C A A C T G A T G C A C G T C T A G G T C A A C T G
C T G A A G C T A C T G C T A G C T G A T C G A G T C A A C T G G A C T A G T C C A T G A C G T C T G A C G T A T C G A G C T A A C G T A C G T A C G T A C G T A C G T A C G T

NHLH1/MA0048.2/Jaspar

Match Rank:3
Score:0.47
Offset:6
Orientation:reverse strand
Alignment:AGTCGTTGTAGCTGAG
------CGCAGCTGCG
 C G T A A C T G A C G T G T A C A C T G A C G T C G A T A C T G C G A T G T C A A C T G A T G C A C G T C T A G G T C A A C T G
A C G T A C G T A C G T A C G T A C G T A C G T T G A C C T A G A T G C T C G A A T C G T A G C A C G T A C T G A G T C A C T G

PB0032.1_IRC900814_1/Jaspar

Match Rank:4
Score:0.46
Offset:-3
Orientation:reverse strand
Alignment:---AGTCGTTGTAGCTGAG
GNNATTTGTCGTAANN---
 A C G T A C G T A C G T C G T A A C T G A C G T G T A C A C T G A C G T C G A T A C T G C G A T G T C A A C T G A T G C A C G T C T A G G T C A A C T G
T C A G G A T C G C A T C G T A C G A T C G A T G A C T A C T G G A C T A G T C A C T G C A G T T C G A C T G A G C T A G C A T A C G T A C G T A C G T

PAX5(Paired,Homeobox),condensed/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer

Match Rank:5
Score:0.46
Offset:1
Orientation:forward strand
Alignment:AGTCGTTGTAGCTGAG
-GTCACGCTCNCTGA-
 C G T A A C T G A C G T G T A C A C T G A C G T C G A T A C T G C G A T G T C A A C T G A T G C A C G T C T A G G T C A A C T G
A C G T A C T G G A C T A G T C C T G A G A T C T C A G A T G C G A C T A G T C A T G C T A G C A G C T A T C G T G C A A C G T

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.45
Offset:5
Orientation:reverse strand
Alignment:AGTCGTTGTAGCTGAG-
-----CTGTTGCTAGGS
 C G T A A C T G A C G T G T A C A C T G A C G T C G A T A C T G C G A T G T C A A C T G A T G C A C G T C T A G G T C A A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A G T C C G A T A C T G A C G T G A C T C T A G A G T C A G C T C T G A C A T G C T A G T A C G

Klf9(Zf)/GBM-Klf9-ChIP-Seq(GSE62211)/Homer

Match Rank:7
Score:0.45
Offset:0
Orientation:reverse strand
Alignment:AGTCGTTGTAGCTGAG
RGTGGGYGTGGC----
 C G T A A C T G A C G T G T A C A C T G A C G T C G A T A C T G C G A T G T C A A C T G A T G C A C G T C T A G G T C A A C T G
C T G A T C A G C A G T C T A G A T C G A C T G G A T C C A T G A C G T C A T G A C T G A G T C A C G T A C G T A C G T A C G T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:8
Score:0.45
Offset:2
Orientation:forward strand
Alignment:AGTCGTTGTAGCTGAG
--CCWTTGTYYB----
 C G T A A C T G A C G T G T A C A C T G A C G T C G A T A C T G C G A T G T C A A C T G A T G C A C G T C T A G G T C A A C T G
A C G T A C G T A T G C A G T C G C A T A G C T A C G T T C A G C G A T A G C T G A T C A T C G A C G T A C G T A C G T A C G T

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:9
Score:0.44
Offset:2
Orientation:forward strand
Alignment:AGTCGTTGTAGCTGAG
--CCATTGTTNY----
 C G T A A C T G A C G T G T A C A C T G A C G T C G A T A C T G C G A T G T C A A C T G A T G C A C G T C T A G G T C A A C T G
A C G T A C G T A T G C G T A C C G T A A G C T G C A T T A C G A G C T A G C T A G T C A G C T A C G T A C G T A C G T A C G T

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:10
Score:0.44
Offset:-3
Orientation:forward strand
Alignment:---AGTCGTTGTAGCTGAG
AGGVNCCTTTGT-------
 A C G T A C G T A C G T C G T A A C T G A C G T G T A C A C T G A C G T C G A T A C T G C G A T G T C A A C T G A T G C A C G T C T A G G T C A A C T G
C G T A C T A G T C A G T C A G A G T C A T G C A G T C G C A T A G C T A C G T A T C G C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T