Information for 5-GTATGGARATGSTGKT (Motif 8)

A T C G A C G T C T G A C A G T C T A G A C T G C G T A C T G A C G T A C G A T A T C G T A G C C G A T A C T G A C T G A C G T
Reverse Opposite:
C G T A G T A C A G T C C G T A A T C G A T G C C G T A C G A T G A C T G A C T T G A C A G T C G C T A A G C T C G T A A T G C
p-value:1e-13
log p-value:-3.088e+01
Information Content per bp:1.738
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif1.30%
Number of Background Sequences with motif3.1
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets69.6 +/- 15.8bp
Average Position of motif in Background64.9 +/- 11.5bp
Strand Bias (log2 ratio + to - strand density)-1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POU5F1B/MA0792.1/Jaspar

Match Rank:1
Score:0.65
Offset:1
Orientation:forward strand
Alignment:GTATGGARATGSTGKT
-TATGCAAAT------
 A T C G A C G T C T G A C A G T C T A G A C T G C G T A C T G A C G T A C G A T A T C G T A G C C G A T A C T G A C T G A C G T
A C G T G A C T C G T A A G C T C A T G A G T C C G T A C G T A C G T A C G A T A C G T A C G T A C G T A C G T A C G T A C G T

POU3F4/MA0789.1/Jaspar

Match Rank:2
Score:0.64
Offset:1
Orientation:forward strand
Alignment:GTATGGARATGSTGKT
-TATGCAAAT------
 A T C G A C G T C T G A C A G T C T A G A C T G C G T A C T G A C G T A C G A T A T C G T A G C C G A T A C T G A C T G A C G T
A C G T G C A T C T G A G A C T C A T G A G T C C G T A G C T A C G T A C G A T A C G T A C G T A C G T A C G T A C G T A C G T

POU2F1/MA0785.1/Jaspar

Match Rank:3
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-GTATGGARATGSTGKT
AATATGCAAATT-----
 A C G T A T C G A C G T C T G A C A G T C T A G A C T G C G T A C T G A C G T A C G A T A T C G T A G C C G A T A C T G A C T G A C G T
G C T A C G T A G A C T C G T A A G C T C A T G A G T C C G T A C T G A C G T A C G A T C A G T A C G T A C G T A C G T A C G T A C G T

POU3F1/MA0786.1/Jaspar

Match Rank:4
Score:0.60
Offset:0
Orientation:forward strand
Alignment:GTATGGARATGSTGKT
TTATGCAAATTA----
 A T C G A C G T C T G A C A G T C T A G A C T G C G T A C T G A C G T A C G A T A T C G T A G C C G A T A C T G A C T G A C G T
C G A T G C A T C T G A G A C T C A T G A G T C C G T A C G T A C G T A C G A T C A G T G C T A A C G T A C G T A C G T A C G T

Pou2f3/MA0627.1/Jaspar

Match Rank:5
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--GTATGGARATGSTGKT
TTGTATGCAAATTAGA--
 A C G T A C G T A T C G A C G T C T G A C A G T C T A G A C T G C G T A C T G A C G T A C G A T A T C G T A G C C G A T A C T G A C T G A C G T
A C G T G C A T C A T G G A C T C G T A A G C T A C T G A G T C C G T A C G T A C G T A C A G T A C G T G T C A C T A G T G C A A C G T A C G T

PH0145.1_Pou2f3/Jaspar

Match Rank:6
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--GTATGGARATGSTGKT
TTGTATGCAAATTAGA--
 A C G T A C G T A T C G A C G T C T G A C A G T C T A G A C T G C G T A C T G A C G T A C G A T A T C G T A G C C G A T A C T G A C T G A C G T
A C G T G C A T C A T G G A C T C G T A A G C T A C T G A G T C C G T A C G T A C G T A C A G T A C G T G T C A C T A G T G C A A C G T A C G T

Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:7
Score:0.60
Offset:1
Orientation:forward strand
Alignment:GTATGGARATGSTGKT
-TATGCWAATBAV---
 A T C G A C G T C T G A C A G T C T A G A C T G C G T A C T G A C G T A C G A T A T C G T A G C C G A T A C T G A C T G A C G T
A C G T G A C T C G T A A C G T A C T G A G T C C G T A C T G A C G T A C A G T A C G T G T C A T C A G A C G T A C G T A C G T

PH0144.1_Pou2f2/Jaspar

Match Rank:8
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--GTATGGARATGSTGKT
TTGTATGCAAATTAGA--
 A C G T A C G T A T C G A C G T C T G A C A G T C T A G A C T G C G T A C T G A C G T A C G A T A T C G T A G C C G A T A C T G A C T G A C G T
A G C T G C A T C A T G G C A T C G T A A G C T C A T G A G T C C G T A C G T A C G T A C G A T C A G T G C T A C T A G T G C A A C G T A C G T

POU3F2/MA0787.1/Jaspar

Match Rank:9
Score:0.59
Offset:0
Orientation:forward strand
Alignment:GTATGGARATGSTGKT
TTATGCAAATTA----
 A T C G A C G T C T G A C A G T C T A G A C T G C G T A C T G A C G T A C G A T A T C G T A G C C G A T A C T G A C T G A C G T
C G A T G C A T T C G A G A C T C A T G A G T C G C T A C G T A G C T A C G A T A C G T G C T A A C G T A C G T A C G T A C G T

Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer

Match Rank:10
Score:0.58
Offset:1
Orientation:forward strand
Alignment:GTATGGARATGSTGKT
-WATGCAAATGAG---
 A T C G A C G T C T G A C A G T C T A G A C T G C G T A C T G A C G T A C G A T A T C G T A G C C G A T A C T G A C T G A C G T
A C G T G C A T C G T A C G A T A C T G A G T C G C T A C T G A C G T A C A G T A C T G C G T A T C A G A C G T A C G T A C G T