Information for 3-RTGTCACATGGAT (Motif 4)

C T G A A C G T C A T G A C G T A G T C C G T A A T G C C G T A A C G T A C T G C T A G C G T A A G C T
Reverse Opposite:
C T G A A C G T A G T C A G T C G T C A A C G T A T C G A C G T A C T G G T C A G A T C C G T A A G C T
p-value:1e-14
log p-value:-3.371e+01
Information Content per bp:1.839
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif1.30%
Number of Background Sequences with motif2.1
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets52.8 +/- 28.0bp
Average Position of motif in Background57.6 +/- 5.1bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.14
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NPAS2(bHLH)/Liver-NPAS2-ChIP-Seq(GSE39860)/Homer

Match Rank:1
Score:0.71
Offset:2
Orientation:reverse strand
Alignment:RTGTCACATGGAT
--GTCACGTGGM-
 C T G A A C G T C A T G A C G T A G T C C G T A A T G C C G T A A C G T A C T G C T A G C G T A A G C T
A C G T A C G T T C A G C A G T A G T C C G T A A T G C T C A G G C A T A C T G A C T G T G A C A C G T

USF2/MA0526.1/Jaspar

Match Rank:2
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:RTGTCACATGGAT
-GGTCACATGAC-
 C T G A A C G T C A T G A C G T A G T C C G T A A T G C C G T A A C G T A C T G C T A G C G T A A G C T
A C G T C T A G T C A G A G C T A G T C C G T A A G T C T C G A A C G T A C T G T C G A A G T C A C G T

Usf2(bHLH)/C2C12-Usf2-ChIP-Seq(GSE36030)/Homer

Match Rank:3
Score:0.65
Offset:2
Orientation:forward strand
Alignment:RTGTCACATGGAT
--GTCACGTGGT-
 C T G A A C G T C A T G A C G T A G T C C G T A A T G C C G T A A C G T A C T G C T A G C G T A A G C T
A C G T A C G T T C A G A C G T A G T C T C G A A G T C T C A G G C A T C T A G C T A G A G C T A C G T

MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer

Match Rank:4
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:RTGTCACATGGAT
--GTCACATGAY-
 C T G A A C G T C A T G A C G T A G T C C G T A A T G C C G T A A C G T A C T G C T A G C G T A A G C T
A C G T A C G T T C A G G A C T G T A C G T C A A G T C T C G A G C A T A T C G T C G A A G T C A C G T

Myc/MA0147.2/Jaspar

Match Rank:5
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:RTGTCACATGGAT
-AAGCACATGG--
 C T G A A C G T C A T G A C G T A G T C C G T A A T G C C G T A A C G T A C T G C T A G C G T A A G C T
A C G T T C G A C T G A T A C G A G T C C G T A A G T C C T G A A C G T A C T G A C T G A C G T A C G T

USF1/MA0093.2/Jaspar

Match Rank:6
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:RTGTCACATGGAT
-GGTCACGTGGC-
 C T G A A C G T C A T G A C G T A G T C C G T A A T G C C G T A A C G T A C T G C T A G C G T A A G C T
A C G T C T A G C T A G G A C T A G T C C G T A A G T C T C A G C G A T A C T G T C A G A G T C A C G T

Mitf/MA0620.1/Jaspar

Match Rank:7
Score:0.61
Offset:1
Orientation:forward strand
Alignment:RTGTCACATGGAT
-GGTCACGTGG--
 C T G A A C G T C A T G A C G T A G T C C G T A A T G C C G T A A C G T A C T G C T A G C G T A A G C T
A C G T C T A G T C A G A C G T T G A C G T C A A G T C T C A G G C A T A C T G T C A G A C G T A C G T

PH0083.1_Irx3_1/Jaspar

Match Rank:8
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-RTGTCACATGGAT---
ANTATTACATGTANNNN
 A C G T C T G A A C G T C A T G A C G T A G T C C G T A A T G C C G T A A C G T A C T G C T A G C G T A A G C T A C G T A C G T A C G T
G C T A C T A G G C A T G C T A A C G T C G A T C G T A A G T C C G T A G C A T T A C G C G A T G C T A A G C T G C A T G A C T G C A T

Olig2(bHLH)/Neuron-Olig2-ChIP-Seq(GSE30882)/Homer

Match Rank:9
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:RTGTCACATGGAT
--AACAKATGGY-
 C T G A A C G T C A T G A C G T A G T C C G T A A T G C C G T A A C G T A C T G C T A G C G T A A G C T
A C G T A C G T C T G A T G C A A G T C T C G A A C T G T G C A G C A T A C T G A C T G G A C T A C G T

NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer

Match Rank:10
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:RTGTCACATGGAT
--AACAGATGGT-
 C T G A A C G T C A T G A C G T A G T C C G T A A T G C C G T A A C G T A C T G C T A G C G T A A G C T
A C G T A C G T T C G A T C G A A G T C C G T A A C T G G T C A G C A T A C T G A C T G A G C T A C G T