Information for 20-GDCACDGTCCCACACC (Motif 35)

A C T G C G T A A T G C C G T A A G T C C A G T A C T G A C G T A T G C G T A C G T A C C G T A G T A C C G T A A G T C A G T C
Reverse Opposite:
C T A G A C T G A C G T A C T G C G A T A C T G A C T G A T C G C G T A A G T C G T C A A C T G C G A T T A C G G A C T A G T C
p-value:1e-6
log p-value:-1.465e+01
Information Content per bp:1.780
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.56%
Number of Background Sequences with motif0.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets19.7 +/- 9.5bp
Average Position of motif in Background45.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:1
Score:0.59
Offset:4
Orientation:forward strand
Alignment:GDCACDGTCCCACACC-
----CTGTCTGTCACCT
 A C T G C G T A A T G C C G T A A G T C C A G T A C T G A C G T A T G C G T A C G T A C C G T A G T A C C G T A A G T C A G T C A C G T
A C G T A C G T A C G T A C G T T A G C G C A T T C A G A C G T A G T C A C G T T A C G C A G T A T G C G C T A T A G C G A T C G A C T

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.54
Offset:5
Orientation:reverse strand
Alignment:GDCACDGTCCCACACC-
-----TGTCTGDCACCT
 A C T G C G T A A T G C C G T A A G T C C A G T A C T G A C G T A T G C G T A C G T A C C G T A G T A C C G T A A G T C A G T C A C G T
A C G T A C G T A C G T A C G T A C G T G C A T A C T G C G A T A G T C A C G T T A C G C A T G A G T C C G T A T A G C G A T C G A C T

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.54
Offset:3
Orientation:forward strand
Alignment:GDCACDGTCCCACACC
---NCTGTCAATCAN-
 A C T G C G T A A T G C C G T A A G T C C A G T A C T G A C G T A T G C G T A C G T A C C G T A G T A C C G T A A G T C A G T C
A C G T A C G T A C G T T A G C T A G C G A C T C T A G A G C T A G T C G T C A T G C A A C G T A T G C G C T A T G C A A C G T

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:4
Score:0.54
Offset:2
Orientation:forward strand
Alignment:GDCACDGTCCCACACC
--GSCTGTCACTCA--
 A C T G C G T A A T G C C G T A A G T C C A G T A C T G A C G T A T G C G T A C G T A C C G T A G T A C C G T A A G T C A G T C
A C G T A C G T C T A G A T G C A T G C C G A T A C T G G A C T A T G C G C T A T G A C A G C T T A G C G C T A A C G T A C G T

Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer

Match Rank:5
Score:0.53
Offset:8
Orientation:forward strand
Alignment:GDCACDGTCCCACACC--
--------GCCACACCCA
 A C T G C G T A A T G C C G T A A G T C C A G T A C T G A C G T A T G C G T A C G T A C C G T A G T A C C G T A A G T C A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G G T A C A G T C T G C A A G T C C T G A A G T C A G T C A G T C G C T A

EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer

Match Rank:6
Score:0.53
Offset:7
Orientation:reverse strand
Alignment:GDCACDGTCCCACACC---
-------GGCCACACCCAN
 A C T G C G T A A T G C C G T A A G T C C A G T A C T G A C G T A T G C G T A C G T A C C G T A G T A C C G T A A G T C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G C T A G T G A C A G T C G T C A A G T C C T G A A G T C A G T C A G T C G C T A A C T G

PB0114.1_Egr1_2/Jaspar

Match Rank:7
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:GDCACDGTCCCACACC---
---NNAGTCCCACTCNNNN
 A C T G C G T A A T G C C G T A A G T C C A G T A C T G A C G T A T G C G T A C G T A C C G T A G T A C C G T A A G T C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T T G A C G A T C C G T A C T A G G C A T G T A C G A T C G A T C G T C A A G T C A G C T G A T C T A G C C T A G T G A C T G C A

Klf1/MA0493.1/Jaspar

Match Rank:8
Score:0.53
Offset:7
Orientation:forward strand
Alignment:GDCACDGTCCCACACC--
-------GGCCACACCCA
 A C T G C G T A A T G C C G T A A G T C C A G T A C T G A C G T A T G C G T A C G T A C C G T A G T A C C G T A A G T C A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G T C A G T G A C G A T C G T C A A G T C C T G A A G T C A G T C A G T C G C T A

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:9
Score:0.52
Offset:3
Orientation:forward strand
Alignment:GDCACDGTCCCACACC
---SCTGTCAVTCAV-
 A C T G C G T A A T G C C G T A A G T C C A G T A C T G A C G T A T G C G T A C G T A C C G T A G T A C C G T A A G T C A G T C
A C G T A C G T A C G T T A C G A T G C G A C T A C T G A G C T A G T C G T C A T G C A A C G T A G T C G C T A T G C A A C G T

TBX5/MA0807.1/Jaspar

Match Rank:10
Score:0.52
Offset:9
Orientation:reverse strand
Alignment:GDCACDGTCCCACACC-
---------TCACACCT
 A C T G C G T A A T G C C G T A A G T C C A G T A C T G A C G T A T G C G T A C G T A C C G T A G T A C C G T A A G T C A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T T G A C T C G A A G T C T G C A G T A C A G T C G A C T