Information for 12-AGTGTGTGAG (Motif 31)

T G C A A T C G G A C T A C T G A G C T C T A G G C A T A T C G T G C A T A C G
Reverse Opposite:
A T G C A C G T T A G C C G T A G A T C T C G A T G A C C T G A T A G C A C G T
p-value:1e-6
log p-value:-1.541e+01
Information Content per bp:1.657
Number of Target Sequences with motif53.0
Percentage of Target Sequences with motif9.87%
Number of Background Sequences with motif1779.1
Percentage of Background Sequences with motif4.58%
Average Position of motif in Targets55.4 +/- 28.2bp
Average Position of motif in Background50.7 +/- 43.8bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.23
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0130.1_Gm397_2/Jaspar

Match Rank:1
Score:0.69
Offset:-3
Orientation:reverse strand
Alignment:---AGTGTGTGAG---
NNGCGTGTGTGCNGCN
 A C G T A C G T A C G T T G C A A T C G G A C T A C T G A G C T C T A G G C A T A T C G T G C A T A C G A C G T A C G T A C G T
C A G T A C G T C T A G T G A C C A T G A C G T T A C G A G C T C A T G A G C T A C T G A G T C A G T C C A T G A G T C G A C T

MGA/MA0801.1/Jaspar

Match Rank:2
Score:0.64
Offset:1
Orientation:forward strand
Alignment:AGTGTGTGAG
-AGGTGTGA-
 T G C A A T C G G A C T A C T G A G C T C T A G G C A T A T C G T G C A T A C G
A C G T C T G A T C A G A T C G A G C T C T A G G A C T A C T G C T G A A C G T

PB0168.1_Sox14_2/Jaspar

Match Rank:3
Score:0.62
Offset:-5
Orientation:reverse strand
Alignment:-----AGTGTGTGAG
NNNCCATTGTGTNAN
 A C G T A C G T A C G T A C G T A C G T T G C A A T C G G A C T A C T G A G C T C T A G G C A T A T C G T G C A T A C G
A T C G T G A C A C T G A G T C G A T C C G T A A C G T A C G T T A C G G C A T A T C G A G C T T C A G T G C A T C A G

Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer

Match Rank:4
Score:0.62
Offset:0
Orientation:forward strand
Alignment:AGTGTGTGAG
AAGGTGTKAA
 T G C A A T C G G A C T A C T G A G C T C T A G G C A T A T C G T G C A T A C G
C T G A C T G A C A T G A T C G A G C T A T C G G A C T C A T G C T G A G T C A

TBX1/MA0805.1/Jaspar

Match Rank:5
Score:0.61
Offset:1
Orientation:forward strand
Alignment:AGTGTGTGAG
-AGGTGTGA-
 T G C A A T C G G A C T A C T G A G C T C T A G G C A T A T C G T G C A T A C G
A C G T C T G A T C A G A C T G A G C T A T C G G A C T A C T G T G C A A C G T

EOMES/MA0800.1/Jaspar

Match Rank:6
Score:0.61
Offset:0
Orientation:forward strand
Alignment:AGTGTGTGAG---
AAGGTGTGAAAAT
 T G C A A T C G G A C T A C T G A G C T C T A G G C A T A T C G T G C A T A C G A C G T A C G T A C G T
C T G A C T G A C T A G A C T G A G C T T C A G G A C T A C T G T C G A G C T A G T C A C G T A G A C T

Egr2(Zf)/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer

Match Rank:7
Score:0.60
Offset:0
Orientation:forward strand
Alignment:AGTGTGTGAG--
NGCGTGGGCGGR
 T G C A A T C G G A C T A C T G A G C T C T A G G C A T A T C G T G C A T A C G A C G T A C G T
A C G T T A C G G A T C A C T G A C G T C T A G A C T G A C T G G A T C C T A G C A T G C T A G

TBX21/MA0690.1/Jaspar

Match Rank:8
Score:0.60
Offset:0
Orientation:forward strand
Alignment:AGTGTGTGAG
AAGGTGTGAA
 T G C A A T C G G A C T A C T G A G C T C T A G G C A T A T C G T G C A T A C G
C T G A C T G A C T A G A C T G A G C T C A T G G A C T A C T G C T G A G C T A

Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer

Match Rank:9
Score:0.60
Offset:0
Orientation:forward strand
Alignment:AGTGTGTGAG
TGCGTGGGYG
 T G C A A T C G G A C T A C T G A G C T C T A G G C A T A T C G T G C A T A C G
C A G T T C A G G A T C A C T G A C G T C T A G A C T G A C T G G A C T C T A G

PB0013.1_Eomes_1/Jaspar

Match Rank:10
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---AGTGTGTGAG----
GAAAAGGTGTGAAAATT
 A C G T A C G T A C G T T G C A A T C G G A C T A C T G A G C T C T A G G C A T A T C G T G C A T A C G A C G T A C G T A C G T A C G T
A C G T T C G A G C T A C T G A C T G A C T A G A C T G A G C T C T A G G A C T A C T G C T G A G T C A G T C A G C T A G A C T G A C T