Information for 15-CTACACCATKMTG (Motif 28)

A G T C A G C T C T G A A T G C C G T A T A G C A G T C C T G A A G C T A C G T T G C A A C G T A C T G
Reverse Opposite:
G T A C C G T A A C G T T G C A C T G A A G C T C T A G A C T G G C A T T A C G G A C T T C G A C T A G
p-value:1e-8
log p-value:-1.940e+01
Information Content per bp:1.712
Number of Target Sequences with motif29.0
Percentage of Target Sequences with motif5.40%
Number of Background Sequences with motif570.6
Percentage of Background Sequences with motif1.47%
Average Position of motif in Targets44.9 +/- 23.3bp
Average Position of motif in Background47.7 +/- 41.7bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.10
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

YY1/MA0095.2/Jaspar

Match Rank:1
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:CTACACCATKMTG
-GCNGCCATCTTG
 A G T C A G C T C T G A A T G C C G T A T A G C A G T C C T G A A G C T A C G T T G C A A C G T A C T G
A C G T C A T G A G T C T G A C C A T G A G T C A G T C C T G A A C G T A G T C A G C T G A C T A C T G

PB0168.1_Sox14_2/Jaspar

Match Rank:2
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:CTACACCATKMTG----
--NNNCCATTGTGTNAN
 A G T C A G C T C T G A A T G C C G T A T A G C A G T C C T G A A G C T A C G T T G C A A C G T A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A T C G T G A C A C T G A G T C G A T C C G T A A C G T A C G T T A C G G C A T A T C G A G C T T C A G T G C A T C A G

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:3
Score:0.54
Offset:5
Orientation:forward strand
Alignment:CTACACCATKMTG--
-----CCATTGTTYB
 A G T C A G C T C T G A A T G C C G T A T A G C A G T C C T G A A G C T A C G T T G C A A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A T G C G A T C C G T A A G C T C A G T A T C G G C A T A G C T G A C T A C T G

Sox2/MA0143.3/Jaspar

Match Rank:4
Score:0.53
Offset:5
Orientation:forward strand
Alignment:CTACACCATKMTG
-----CCTTTGTT
 A G T C A G C T C T G A A T G C C G T A T A G C A G T C C T G A A G C T A C G T T G C A A C G T A C T G
A C G T A C G T A C G T A C G T A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:5
Score:0.53
Offset:6
Orientation:forward strand
Alignment:CTACACCATKMTG---
------CCTGCTGAGH
 A G T C A G C T C T G A A T G C C G T A T A G C A G T C C T G A A G C T A C G T T G C A A C G T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A

Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer

Match Rank:6
Score:0.53
Offset:4
Orientation:reverse strand
Alignment:CTACACCATKMTG-
----NCCATTGTTY
 A G T C A G C T C T G A A T G C C G T A T A G C A G T C C T G A A G C T A C G T T G C A A C G T A C T G A C G T
A C G T A C G T A C G T A C G T C T A G A G T C G A T C G C T A C G A T A C G T A T C G A C G T A G C T G A C T

PGR(NR)/EndoStromal-PGR-ChIP-Seq(GSE69539)/Homer

Match Rank:7
Score:0.52
Offset:1
Orientation:forward strand
Alignment:CTACACCATKMTG---
-AAGAACATWHTGTTC
 A G T C A G C T C T G A A T G C C G T A T A G C A G T C C T G A A G C T A C G T T G C A A C G T A C T G A C G T A C G T A C G T
A C G T C G T A C T G A C T A G C G T A C G T A A G T C C G T A C A G T G C A T G T C A C G A T A C T G A C G T G C A T G A T C

PB0137.1_Irf3_2/Jaspar

Match Rank:8
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:CTACACCATKMTG-
NNGCACCTTTCTCC
 A G T C A G C T C T G A A T G C C G T A T A G C A G T C C T G A A G C T A C G T T G C A A C G T A C T G A C G T
A G C T G A T C T C A G T A G C G C T A A T G C T A G C G C A T C G A T G C A T G A T C G C A T G T A C G A T C

Sox1/MA0870.1/Jaspar

Match Rank:9
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--CTACACCATKMTG
AACAATAACATTGTT
 A C G T A C G T A G T C A G C T C T G A A T G C C G T A T A G C A G T C C T G A A G C T A C G T T G C A A C G T A C T G
T G C A G C T A A G T C G T C A G T C A C G A T C G T A T C G A A T G C C G T A A C G T A G C T A C T G G A C T A G C T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:10
Score:0.51
Offset:3
Orientation:reverse strand
Alignment:CTACACCATKMTG--
---CCCCCTGCTGTG
 A G T C A G C T C T G A A T G C C G T A T A G C A G T C C T G A A G C T A C G T T G C A A C G T A C T G A C G T A C G T
A C G T A C G T A C G T G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G