Information for 7-GCACGGTGAG (Motif 23)

A T C G T A G C C G T A A T G C A C T G C A T G A C G T C T A G C G T A A C T G
Reverse Opposite:
A G T C A C G T A G T C G T C A G T A C A G T C A T C G A C G T A C T G A T G C
p-value:1e-9
log p-value:-2.092e+01
Information Content per bp:1.814
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif2.23%
Number of Background Sequences with motif73.5
Percentage of Background Sequences with motif0.19%
Average Position of motif in Targets33.2 +/- 16.5bp
Average Position of motif in Background56.7 +/- 31.6bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:1
Score:0.66
Offset:2
Orientation:forward strand
Alignment:GCACGGTGAG---
--CAGGTAAGTAT
 A T C G T A G C C G T A A T G C A C T G C A T G A C G T C T A G C G T A A C T G A C G T A C G T A C G T
A C G T A C G T T G A C C G T A C T A G A C T G A C G T C T G A C G T A C T A G C G A T C T G A G A C T

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:2
Score:0.55
Offset:1
Orientation:forward strand
Alignment:GCACGGTGAG-
-CCTGCTGAGH
 A T C G T A G C C G T A A T G C A C T G C A T G A C G T C T A G C G T A A C T G A C G T
A C G T A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A

MZF1/MA0056.1/Jaspar

Match Rank:3
Score:0.55
Offset:3
Orientation:forward strand
Alignment:GCACGGTGAG
---TGGGGA-
 A T C G T A G C C G T A A T G C A C T G C A T G A C G T C T A G C G T A A C T G
A C G T A C G T A C G T A G C T A C T G C T A G A C T G A C T G C T G A A C G T

EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer

Match Rank:4
Score:0.55
Offset:1
Orientation:forward strand
Alignment:GCACGGTGAG---
-NTGGGTGTGGCC
 A T C G T A G C C G T A A T G C A C T G C A T G A C G T C T A G C G T A A C T G A C G T A C G T A C G T
A C G T T G A C C G A T A C T G A C T G A C T G G A C T A C T G A C G T A C T G A C T G G A T C G A T C

MZF1(var.2)/MA0057.1/Jaspar

Match Rank:5
Score:0.54
Offset:0
Orientation:forward strand
Alignment:GCACGGTGAG
GGAGGGGGAA
 A T C G T A G C C G T A A T G C A C T G C A T G A C G T C T A G C G T A A C T G
A C T G C A G T G T C A A C T G A C T G A T C G A C T G C A T G C T G A C T G A

ARNT::HIF1A/MA0259.1/Jaspar

Match Rank:6
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:GCACGGTGAG
GCACGTNC--
 A T C G T A G C C G T A A T G C A C T G C A T G A C G T C T A G C G T A A C T G
A T C G A G T C C G T A A G T C C T A G A G C T T G A C A T G C A C G T A C G T

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:7
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:GCACGGTGAG
TCAAGGTCAN
 A T C G T A G C C G T A A T G C A C T G C A T G A C G T C T A G C G T A A C T G
A G C T T A G C C T G A T C G A A T C G C A T G C A G T A T G C T C G A G T A C

Klf1/MA0493.1/Jaspar

Match Rank:8
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:GCACGGTGAG---
--TGGGTGTGGCN
 A T C G T A G C C G T A A T G C A C T G C A T G A C G T C T A G C G T A A C T G A C G T A C G T A C G T
A C G T A C G T C G A T C T A G A C T G A C T G G A C T A C T G C A G T C T A G A C T G A G T C G A T C

PB0111.1_Bhlhb2_2/Jaspar

Match Rank:9
Score:0.53
Offset:-7
Orientation:forward strand
Alignment:-------GCACGGTGAG------
TGTCATTACACGTGGAAGGCGGT
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T C G T A G C C G T A A T G C A C T G C A T G A C G T C T A G C G T A A C T G A C G T A C G T A C G T A C G T A C G T A C G T
A G C T C T A G G A C T A T G C C T A G G A C T C A G T T G C A G T A C C T G A A G T C T C A G G A C T A C T G A C T G G T C A C T G A C T A G A T C G G T A C C T A G C T A G G C A T

KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer

Match Rank:10
Score:0.52
Offset:2
Orientation:forward strand
Alignment:GCACGGTGAG--
--DGGGYGKGGC
 A T C G T A G C C G T A A T G C A C T G C A T G A C G T C T A G C G T A A C T G A C G T A C G T
A C G T A C G T C G T A C T A G A C T G A C T G G A C T C T A G C A G T C T A G C A T G G A T C