Information for 8-TTTCMCTGCAACTTCA (Motif 13)

A C G T A C G T A C G T A T G C T G A C A T G C A C G T A C T G G T A C C G T A C G T A A T G C A C G T A C G T T A G C G C T A
Reverse Opposite:
C G A T A C T G C G T A C G T A A T C G G A C T C G A T C A T G G T A C C G T A A T C G A C T G A T C G G T C A G T C A C G T A
p-value:1e-12
log p-value:-2.816e+01
Information Content per bp:1.744
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif1.12%
Number of Background Sequences with motif2.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets47.7 +/- 33.0bp
Average Position of motif in Background62.1 +/- 20.7bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NKX2-8/MA0673.1/Jaspar

Match Rank:1
Score:0.52
Offset:8
Orientation:forward strand
Alignment:TTTCMCTGCAACTTCA-
--------CCACTTGAA
 A C G T A C G T A C G T A T G C T G A C A T G C A C G T A C T G G T A C C G T A C G T A A T G C A C G T A C G T T A G C G C T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C G A T C G T C A G A T C A G C T G A C T T A C G G C T A T C G A

PB0091.1_Zbtb3_1/Jaspar

Match Rank:2
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--TTTCMCTGCAACTTCA
AATCGCACTGCATTCCG-
 A C G T A C G T A C G T A C G T A C G T A T G C T G A C A T G C A C G T A C T G G T A C C G T A C G T A A T G C A C G T A C G T T A G C G C T A
C T G A C T G A A C G T A T G C A T C G G T A C C T G A A T G C C G A T A C T G A T G C G T C A A G C T A C G T A T G C A T G C A C T G A C G T

POL008.1_DCE_S_I/Jaspar

Match Rank:3
Score:0.51
Offset:10
Orientation:forward strand
Alignment:TTTCMCTGCAACTTCA
----------GCTTCC
 A C G T A C G T A C G T A T G C T G A C A T G C A C G T A C T G G T A C C G T A C G T A A T G C A C G T A C G T T A G C G C T A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A T G C A G C T A C G T A T G C A T G C

CREB3L1/MA0839.1/Jaspar

Match Rank:4
Score:0.50
Offset:5
Orientation:forward strand
Alignment:TTTCMCTGCAACTTCA---
-----ATGCCACGTCATCA
 A C G T A C G T A C G T A T G C T G A C A T G C A C G T A C T G G T A C C G T A C G T A A T G C A C G T A C G T T A G C G C T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C G A G A C T C T A G G T A C G A T C C T G A A T G C T C A G C G A T T G A C C T G A A G C T G A T C C T G A

NKX2-3/MA0672.1/Jaspar

Match Rank:5
Score:0.50
Offset:7
Orientation:forward strand
Alignment:TTTCMCTGCAACTTCA-
-------ACCACTTGAA
 A C G T A C G T A C G T A T G C T G A C A T G C A C G T A C T G G T A C C G T A C G T A A T G C A C G T A C G T T A G C G C T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G C A T A G C G A T C G C T A G T A C A C G T A G C T T C A G C G T A T C G A

CREB3/MA0638.1/Jaspar

Match Rank:6
Score:0.50
Offset:5
Orientation:forward strand
Alignment:TTTCMCTGCAACTTCA---
-----GTGCCACGTCATCA
 A C G T A C G T A C G T A T G C T G A C A T G C A C G T A C T G G T A C C G T A C G T A A T G C A C G T A C G T T A G C G C T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C A G A G C T C A T G G T A C A T G C C G T A A G T C C T A G G A C T T G A C C T G A A G C T G T A C T C G A

PB0146.1_Mafk_2/Jaspar

Match Rank:7
Score:0.49
Offset:3
Orientation:reverse strand
Alignment:TTTCMCTGCAACTTCA--
---CCTTGCAATTTTTNN
 A C G T A C G T A C G T A T G C T G A C A T G C A C G T A C T G G T A C C G T A C G T A A T G C A C G T A C G T T A G C G C T A A C G T A C G T
A C G T A C G T A C G T A G T C T A G C C A G T A C G T C T A G G T A C C T G A G T C A C G A T C G A T G A C T G A C T A G C T C A G T A G T C

PH0113.1_Nkx2-4/Jaspar

Match Rank:8
Score:0.48
Offset:4
Orientation:forward strand
Alignment:TTTCMCTGCAACTTCA----
----TAAGCCACTTGAAATT
 A C G T A C G T A C G T A T G C T G A C A T G C A C G T A C T G G T A C C G T A C G T A A T G C A C G T A C G T T A G C G C T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G C A T C G T A C G T A C T A G T A G C G A T C G C T A G T A C A C G T G A C T T C A G C G T A T G C A G C T A G C A T G A C T

Rfx6(HTH)/Min6b1-Rfx6.HA-ChIP-Seq(GSE62844)/Homer

Match Rank:9
Score:0.48
Offset:-2
Orientation:forward strand
Alignment:--TTTCMCTGCAACTTCA
TGTTKCCTAGCAACM---
 A C G T A C G T A C G T A C G T A C G T A T G C T G A C A T G C A C G T A C T G G T A C C G T A C G T A A T G C A C G T A C G T T A G C G C T A
C A G T T C A G A G C T G A C T A C G T A G T C G A T C G A C T C T G A A C T G G A T C C G T A C T G A A G T C G T A C A C G T A C G T A C G T

PH0171.1_Nkx2-1/Jaspar

Match Rank:10
Score:0.48
Offset:4
Orientation:forward strand
Alignment:TTTCMCTGCAACTTCA----
----TAAGCCACTTGAAATT
 A C G T A C G T A C G T A T G C T G A C A T G C A C G T A C T G G T A C C G T A C G T A A T G C A C G T A C G T T A G C G C T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A G C T T C G A C T G A A T C G T A G C A G T C G C T A G T A C A C G T G A C T T C A G C G T A T G C A G T C A G C A T G C A T