Information for 6-DGAGTTTCARGTTCCC (Motif 9)

C G T A C T A G G T C A C A T G A C G T A C G T A G C T A T G C C G T A C T G A A C T G C G A T C G A T A G T C A G T C G T A C
Reverse Opposite:
A C T G C T A G T C A G G C T A C G T A T G A C A G C T G A C T A T C G C T G A C G T A C G T A G T A C A C G T A G T C G C A T
p-value:1e-12
log p-value:-2.862e+01
Information Content per bp:1.712
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.39%
Number of Background Sequences with motif17.9
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets61.8 +/- 20.0bp
Average Position of motif in Background38.5 +/- 23.1bp
Strand Bias (log2 ratio + to - strand density)0.8
Multiplicity (# of sites on avg that occur together)1.10
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

STAT1::STAT2/MA0517.1/Jaspar

Match Rank:1
Score:0.72
Offset:0
Orientation:forward strand
Alignment:DGAGTTTCARGTTCCC
TCAGTTTCATTTTCC-
 C G T A C T A G G T C A C A T G A C G T A C G T A G C T A T G C C G T A C T G A A C T G C G A T C G A T A G T C A G T C G T A C
C A G T G A T C C T G A T A C G A G C T G C A T A G C T A G T C C T G A A C G T A G C T G C A T A G C T G A T C A G T C A C G T

ISRE(IRF)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:2
Score:0.72
Offset:2
Orientation:forward strand
Alignment:DGAGTTTCARGTTCCC
--AGTTTCAGTTTC--
 C G T A C T A G G T C A C A T G A C G T A C G T A G C T A T G C C G T A C T G A A C T G C G A T C G A T A G T C A G T C G T A C
A C G T A C G T C T G A A T C G A G C T A G C T A C G T T A G C C T G A T A C G C G A T A C G T G A C T A G T C A C G T A C G T

IRF3(IRF)/BMDM-Irf3-ChIP-Seq(GSE67343)/Homer

Match Rank:3
Score:0.69
Offset:2
Orientation:forward strand
Alignment:DGAGTTTCARGTTCCC
--AGTTTCAKTTTC--
 C G T A C T A G G T C A C A T G A C G T A C G T A G C T A T G C C G T A C T G A A C T G C G A T C G A T A G T C A G T C G T A C
A C G T A C G T C T G A T A C G G C A T A G C T A G C T A G T C T C G A A C T G C A G T A G C T A G C T G A T C A C G T A C G T

IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer

Match Rank:4
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:DGAGTTTCARGTTCCC
--ACTTTCACTTTC--
 C G T A C T A G G T C A C A T G A C G T A C G T A G C T A T G C C G T A C T G A A C T G C G A T C G A T A G T C A G T C G T A C
A C G T A C G T C T G A A T G C G A C T C G A T A G C T A G T C C G T A A T G C A C G T A C G T G A C T A G T C A C G T A C G T

Six2(Homeobox)/NephronProgenitor-Six2-ChIP-Seq(GSE39837)/Homer

Match Rank:5
Score:0.65
Offset:3
Orientation:reverse strand
Alignment:DGAGTTTCARGTTCCC
---GKMTCADRTTWC-
 C G T A C T A G G T C A C A T G A C G T A C G T A G C T A T G C C G T A C T G A A C T G C G A T C G A T A G T C A G T C G T A C
A C G T A C G T A C G T C T A G C A G T T G C A A C G T G A T C T C G A C T A G T C A G A C G T C A G T G C A T G A T C A C G T

Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer

Match Rank:6
Score:0.64
Offset:3
Orientation:forward strand
Alignment:DGAGTTTCARGTTCCC
---GKVTCADRTTWC-
 C G T A C T A G G T C A C A T G A C G T A C G T A G C T A T G C C G T A C T G A A C T G C G A T C G A T A G T C A G T C G T A C
A C G T A C G T A C G T C T A G C A T G T G C A A C G T A G T C C G T A C A T G T C A G A C G T A C G T G C T A A G T C A C G T

IRF2(IRF)/Erythroblas-IRF2-ChIP-Seq(GSE36985)/Homer

Match Rank:7
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:DGAGTTTCARGTTCCC
--RSTTTCRSTTTC--
 C G T A C T A G G T C A C A T G A C G T A C G T A G C T A T G C C G T A C T G A A C T G C G A T C G A T A G T C A G T C G T A C
A C G T A C G T T C G A A T G C A C G T A C G T A G C T A G T C C T G A A T G C G C A T G A C T A G C T G A T C A C G T A C G T

IRF8(IRF)/BMDM-IRF8-ChIP-Seq(GSE77884)/Homer

Match Rank:8
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:DGAGTTTCARGTTCCC
--ASTTTCASTTYC--
 C G T A C T A G G T C A C A T G A C G T A C G T A G C T A T G C C G T A C T G A A C T G C G A T C G A T A G T C A G T C G T A C
A C G T A C G T C T G A A T G C G C A T G A C T A G C T A G T C C T G A A T G C G C A T C G A T A G T C A G T C A C G T A C G T

IRF8/MA0652.1/Jaspar

Match Rank:9
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:DGAGTTTCARGTTCCC
--AGTTTCGGTTTCGN
 C G T A C T A G G T C A C A T G A C G T A C G T A G C T A T G C C G T A C T G A A C T G C G A T C G A T A G T C A G T C G T A C
A C G T A C G T C T G A T A C G A C G T G C A T A G C T A G T C C T A G A T C G C G A T C G A T A C G T G A T C C T A G C T G A

IRF2/MA0051.1/Jaspar

Match Rank:10
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---DGAGTTTCARGTTCCC
GTTTTGCTTTCACTTTCC-
 A C G T A C G T A C G T C G T A C T A G G T C A C A T G A C G T A C G T A G C T A T G C C G T A C T G A A C T G C G A T C G A T A G T C A G T C G T A C
C A T G C G A T C G A T G C A T A G C T T C A G A T C G A C G T A C G T A C G T A G T C C T A G A G T C A C G T C G A T A C G T A G T C T A G C A C G T