Information for 5-GMCGGGTCTA (Motif 19)

A C T G G T A C A G T C A C T G A C T G A C T G A G C T A G T C A C G T C G T A
Reverse Opposite:
A C G T C G T A T C A G C T G A A G T C A G T C A G T C A C T G C A T G A G T C
p-value:1e-10
log p-value:-2.313e+01
Information Content per bp:1.874
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.25%
Number of Background Sequences with motif22.0
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets42.6 +/- 23.2bp
Average Position of motif in Background60.6 +/- 27.5bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0157.1_Rara_2/Jaspar

Match Rank:1
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---GMCGGGTCTA---
AGAGCGGGGTCAAGTA
 A C G T A C G T A C G T A C T G G T A C A G T C A C T G A C T G A C T G A G C T A G T C A C G T C G T A A C G T A C G T A C G T
G T C A C A T G G T C A C A T G A G T C A T C G T A C G A C T G C A T G C G A T A G T C C T G A G T C A A C T G A C G T G T C A

PB0153.1_Nr2f2_2/Jaspar

Match Rank:2
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---GMCGGGTCTA---
CGCGCCGGGTCACGTA
 A C G T A C G T A C G T A C T G G T A C A G T C A C T G A C T G A C T G A G C T A G T C A C G T C G T A A C G T A C G T A C G T
T A G C A C T G T G A C A C T G A G T C A T G C C T A G A C T G A C T G A C G T A G T C C T G A T A G C A C T G A G C T G C T A

PB0164.1_Smad3_2/Jaspar

Match Rank:3
Score:0.58
Offset:-6
Orientation:reverse strand
Alignment:------GMCGGGTCTA-
NAGANTGGCGGGGNGNA
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G G T A C A G T C A C T G A C T G A C T G A G C T A G T C A C G T C G T A A C G T
T G A C C T G A T C A G C T G A C A T G A C G T C A T G T C A G A T G C T A C G A T C G T C A G C T A G T A G C C A T G C A G T G T C A

Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer

Match Rank:4
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:GMCGGGTCTA
--NGGGATTA
 A C T G G T A C A G T C A C T G A C T G A C T G A G C T A G T C A C G T C G T A
A C G T A C G T T G A C C T A G C T A G T C A G G T C A G C A T G A C T G C T A

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:5
Score:0.58
Offset:3
Orientation:forward strand
Alignment:GMCGGGTCTA-
---AGGCCTAG
 A C T G G T A C A G T C A C T G A C T G A C T G A G C T A G T C A C G T C G T A A C G T
A C G T A C G T A C G T T G C A A C T G T A C G A T G C A G T C G A C T T C G A A T C G

SP2/MA0516.1/Jaspar

Match Rank:6
Score:0.57
Offset:-7
Orientation:reverse strand
Alignment:-------GMCGGGTCTA
GGGNGGGGGCGGGGC--
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G G T A C A G T C A C T G A C T G A C T G A G C T A G T C A C G T C G T A
T A C G T A C G T A C G T C G A C T A G C T A G C T A G C T A G A C T G G T A C C T A G A T C G C T A G T C A G T A G C A C G T A C G T

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:7
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:GMCGGGTCTA
-CNAGGCCT-
 A C T G G T A C A G T C A C T G A C T G A C T G A G C T A G T C A C G T C G T A
A C G T A T G C G A T C C T G A A C T G A C T G A G T C A G T C A G C T A C G T

PB0185.1_Tcf1_2/Jaspar

Match Rank:8
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--GMCGGGTCTA--
TTGCCCGGATTAGG
 A C G T A C G T A C T G G T A C A G T C A C T G A C T G A C T G A G C T A G T C A C G T C G T A A C G T A C G T
C G A T A C G T T C A G G A T C T A G C A G T C T A C G A C T G C T G A C A G T A C G T C G T A C A T G C T A G

PITX3/MA0714.1/Jaspar

Match Rank:9
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:GMCGGGTCTA--
---GGGATTANN
 A C T G G T A C A G T C A C T G A C T G A C T G A G C T A G T C A C G T C G T A A C G T A C G T
A C G T A C G T A C G T C T A G T C A G C A T G G T C A A G C T G A C T C G T A C T G A A T C G

Zfx/MA0146.2/Jaspar

Match Rank:10
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----GMCGGGTCTA
GGGGCCGAGGCCTG
 A C G T A C G T A C G T A C G T A C T G G T A C A G T C A C T G A C T G A C T G A G C T A G T C A C G T C G T A
A T C G A T C G T A C G C T A G A T G C G A T C A C T G T G C A T C A G A T C G A G T C A G T C A G C T T A C G