Information for 9-GGCGGTTTCWAGG (Motif 10)

A T C G C A T G A G T C C A T G A C T G A G C T A G C T A C G T A G T C C G A T C G T A A C T G A C T G
Reverse Opposite:
A G T C A G T C A C G T C G T A A C T G C G T A C T G A C T G A A G T C G T A C C T A G G A T C A T G C
p-value:1e-12
log p-value:-2.798e+01
Information Content per bp:1.836
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.97%
Number of Background Sequences with motif4.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets66.9 +/- 24.2bp
Average Position of motif in Background66.1 +/- 37.1bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.70
Offset:2
Orientation:reverse strand
Alignment:GGCGGTTTCWAGG-
--CTGTTGCTAGGS
 A T C G C A T G A G T C C A T G A C T G A G C T A G C T A C G T A G T C C G A T C G T A A C T G A C T G A C G T
A C G T A C G T A G T C C G A T A C T G A C G T G A C T C T A G A G T C A G C T C T G A C A T G C T A G T A C G

Bcl6/MA0463.1/Jaspar

Match Rank:2
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:GGCGGTTTCWAGG---
--NGCTTTCTAGGAAN
 A T C G C A T G A G T C C A T G A C T G A G C T A G C T A C G T A G T C C G A T C G T A A C T G A C T G A C G T A C G T A C G T
A C G T A C G T C G A T C A T G G T A C G A C T A G C T G A C T A G T C A G C T C G T A C T A G C A T G T C G A G C T A G T C A

Rfx6(HTH)/Min6b1-Rfx6.HA-ChIP-Seq(GSE62844)/Homer

Match Rank:3
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:GGCGGTTTCWAGG-----
---KGTTGCTAGGMAACA
 A T C G C A T G A G T C C A T G A C T G A G C T A G C T A C G T A G T C C G A T C G T A A C T G A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C A T G A C T G A G C T C G A T C T A G A G T C A G C T C T G A C T A G A C T G T G C A C T G A T C G A A G T C G T C A

PB0055.1_Rfx4_1/Jaspar

Match Rank:4
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:GGCGGTTTCWAGG---
-NNCGTTGCTATGGNN
 A T C G C A T G A G T C C A T G A C T G A G C T A G C T A C G T A G T C C G A T C G T A A C T G A C T G A C G T A C G T A C G T
A C G T G C T A A G T C A T G C C T A G A G C T G A C T C T A G A G T C A G C T C T G A C A G T T A C G A T C G C A G T T C G A

PB0056.1_Rfxdc2_1/Jaspar

Match Rank:5
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:GGCGGTTTCWAGG---
-NCCGTTGCTANGNGN
 A T C G C A T G A G T C C A T G A C T G A G C T A G C T A C G T A G T C C G A T C G T A A C T G A C T G A C G T A C G T A C G T
A C G T G A C T A G T C A T G C C T A G A C G T G A C T C T A G G A T C A G C T C T G A C A G T T A C G A T G C T C A G T C A G

ZBTB12(Zf)/HEK293-ZBTB12.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:GGCGGTTTCWAGG---
-BCNGGTTCTAGANCN
 A T C G C A T G A G T C C A T G A C T G A G C T A G C T A C G T A G T C C G A T C G T A A C T G A C T G A C G T A C G T A C G T
A C G T A G C T T G A C C T A G C A T G C T A G G A C T A C G T A G T C A G C T C T G A T A C G T C G A C G A T A G T C G A C T

Bcl6(Zf)/Liver-Bcl6-ChIP-Seq(GSE31578)/Homer

Match Rank:7
Score:0.61
Offset:1
Orientation:forward strand
Alignment:GGCGGTTTCWAGG---
-NNNCTTTCCAGGAAA
 A T C G C A T G A G T C C A T G A C T G A G C T A G C T A C G T A G T C C G A T C G T A A C T G A C T G A C G T A C G T A C G T
A C G T G A C T C G A T T C A G G A T C G A C T A G C T A G C T A G T C G A T C C G T A C T A G C T A G T C G A T C G A C T G A

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:8
Score:0.61
Offset:6
Orientation:forward strand
Alignment:GGCGGTTTCWAGG---
------NTCAAGGTCA
 A T C G C A T G A G T C C A T G A C T G A G C T A G C T A C G T A G T C C G A T C G T A A C T G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T A T G C G C T A C T G A C T A G A C T G G A C T A G T C C G T A

PB0054.1_Rfx3_1/Jaspar

Match Rank:9
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---GGCGGTTTCWAGG-------
NTNNNNNGTTGCTANGGNNCANA
 A C G T A C G T A C G T A T C G C A T G A G T C C A T G A C T G A G C T A G C T A C G T A G T C C G A T C G T A A C T G A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C G A T C G A T C G T A C G T A G C A T A G T C A T C G C T A G A C G T G A C T C T A G A G T C A G C T C T G A C T G A T A C G A C T G C T A G C A G T T A G C T C G A G T A C C T G A

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:10
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:GGCGGTTTCWAGG
--TGGTTTCAGT-
 A T C G C A T G A G T C C A T G A C T G A G C T A G C T A C G T A G T C C G A T C G T A A C T G A C T G
A C G T A C G T G A C T C T A G T A C G C G A T G C A T A C G T T A G C T C G A A T C G C G A T A C G T