Information for 3-RKCAMTGAKGGCA (Motif 6)

C T A G A C G T G T A C G T C A G T C A C G A T C T A G G T C A A C T G C T A G C T A G T G A C C G T A
Reverse Opposite:
G C A T A C T G G A T C A G T C G T A C C A G T A G T C C G T A C A G T A C G T A C T G G T C A G A T C
p-value:1e-12
log p-value:-2.849e+01
Information Content per bp:1.663
Number of Target Sequences with motif21.0
Percentage of Target Sequences with motif4.03%
Number of Background Sequences with motif233.9
Percentage of Background Sequences with motif0.49%
Average Position of motif in Targets58.0 +/- 21.4bp
Average Position of motif in Background48.0 +/- 30.2bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

VDR(NR),DR3/GM10855-VDR+vitD-ChIP-Seq(GSE22484)/Homer

Match Rank:1
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----RKCAMTGAKGGCA---
NGAGGTCANNGAGTTCANNN
 A C G T A C G T A C G T A C G T C T A G A C G T G T A C G T C A G T C A C G A T C T A G G T C A A C T G C T A G C T A G T G A C C G T A A C G T A C G T A C G T
C T G A T C A G C T G A C T A G C A T G A C G T A T G C C G T A A T G C G C A T T C A G C T G A A C T G A C G T C A G T A G T C C G T A C A G T C T A G C A T G

THAP1/MA0597.1/Jaspar

Match Rank:2
Score:0.60
Offset:5
Orientation:reverse strand
Alignment:RKCAMTGAKGGCA-
-----TNNGGGCAG
 C T A G A C G T G T A C G T C A G T C A C G A T C T A G G T C A A C T G C T A G C T A G T G A C C G T A A C G T
A C G T A C G T A C G T A C G T A C G T C A G T T C A G G T A C C A T G C A T G C T A G G T A C C T G A T C A G

PB0195.1_Zbtb3_2/Jaspar

Match Rank:3
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--RKCAMTGAKGGCA-
CAATCACTGGCAGAAT
 A C G T A C G T C T A G A C G T G T A C G T C A G T C A C G A T C T A G G T C A A C T G C T A G C T A G T G A C C G T A A C G T
A G T C G C T A T C G A G C A T G T A C C T G A T G A C C G A T A C T G A C T G A G T C C T G A C T A G G C T A C G T A C G A T

JUND(var.2)/MA0492.1/Jaspar

Match Rank:4
Score:0.54
Offset:0
Orientation:forward strand
Alignment:RKCAMTGAKGGCA--
AAAGATGATGTCATC
 C T A G A C G T G T A C G T C A G T C A C G A T C T A G G T C A A C T G C T A G C T A G T G A C C G T A A C G T A C G T
C G T A C T G A C G T A T C A G T C G A A C G T A C T G C G T A A G C T T C A G A G C T T G A C C G T A A G C T T G A C

Hic1/MA0739.1/Jaspar

Match Rank:5
Score:0.54
Offset:5
Orientation:reverse strand
Alignment:RKCAMTGAKGGCA-
-----GGTTGGCAT
 C T A G A C G T G T A C G T C A G T C A C G A T C T A G G T C A A C T G C T A G C T A G T G A C C G T A A C G T
A C G T A C G T A C G T A C G T A C G T T C A G T A C G A G C T C A G T C A T G A T C G A G T C T C G A A G C T

HIC2/MA0738.1/Jaspar

Match Rank:6
Score:0.54
Offset:5
Orientation:reverse strand
Alignment:RKCAMTGAKGGCA-
-----NGTGGGCAT
 C T A G A C G T G T A C G T C A G T C A C G A T C T A G G T C A A C T G C T A G C T A G T G A C C G T A A C G T
A C G T A C G T A C G T A C G T A C G T T C A G A T C G A G C T A C T G C A T G A C T G A G T C C T G A A G C T

JUN/MA0488.1/Jaspar

Match Rank:7
Score:0.53
Offset:1
Orientation:forward strand
Alignment:RKCAMTGAKGGCA-
-AAGATGATGTCAT
 C T A G A C G T G T A C G T C A G T C A C G A T C T A G G T C A A C T G C T A G C T A G T G A C C G T A A C G T
A C G T C G T A C G T A C T A G T C G A A C G T A C T G C G T A A C G T A T C G G A C T G T A C C G T A A G C T

Pax2/MA0067.1/Jaspar

Match Rank:8
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-RKCAMTGAKGGCA
AGTCACGC------
 A C G T C T A G A C G T G T A C G T C A G T C A C G A T C T A G G T C A A C T G C T A G C T A G T G A C C G T A
G C T A C T A G G C A T A G T C C T G A G A T C C A T G A T C G A C G T A C G T A C G T A C G T A C G T A C G T

Atf2(bZIP)/3T3L1-Atf2-ChIP-Seq(GSE56872)/Homer

Match Rank:9
Score:0.52
Offset:2
Orientation:forward strand
Alignment:RKCAMTGAKGGCA-
--NRRTGACGTCAT
 C T A G A C G T G T A C G T C A G T C A C G A T C T A G G T C A A C T G C T A G C T A G T G A C C G T A A C G T
A C G T A C G T A T G C T C A G T C G A G C A T A C T G C G T A A G T C T C A G G A C T T G A C C G T A A G C T

PB0099.1_Zfp691_1/Jaspar

Match Rank:10
Score:0.52
Offset:-6
Orientation:reverse strand
Alignment:------RKCAMTGAKGGCA
NNNNTGAGCACTGTNNG--
 A C G T A C G T A C G T A C G T A C G T A C G T C T A G A C G T G T A C G T C A G T C A C G A T C T A G G T C A A C T G C T A G C T A G T G A C C G T A
G C T A G A C T C G T A T C A G A C G T A C T G C T G A A C T G A G T C C G T A G T A C A G C T C A T G A G C T C A G T G T A C T C A G A C G T A C G T