Information for 2-TTTCTAGCAGCTT (Motif 4)

A G C T A C G T A C G T A T G C A C G T C G T A A C T G G T A C C G T A A C T G G T A C A C G T A C G T
Reverse Opposite:
C G T A C G T A C A T G A G T C A C G T A C T G A G T C A C G T C G T A A T C G G T C A C G T A C T G A
p-value:1e-12
log p-value:-2.956e+01
Information Content per bp:1.862
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif1.15%
Number of Background Sequences with motif2.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets27.3 +/- 12.6bp
Average Position of motif in Background44.0 +/- 19.5bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HSF2/MA0770.1/Jaspar

Match Rank:1
Score:0.74
Offset:1
Orientation:forward strand
Alignment:TTTCTAGCAGCTT-
-TTCTAGAACGTTC
 A G C T A C G T A C G T A T G C A C G T C G T A A C T G G T A C C G T A A C T G G T A C A C G T A C G T A C G T
A C G T C G A T C A G T T G A C A G C T T C G A C T A G G T C A C G T A A G T C C T A G C G A T G A C T A G T C

HRE(HSF)/Striatum-HSF1-ChIP-Seq(GSE38000)/Homer

Match Rank:2
Score:0.72
Offset:1
Orientation:forward strand
Alignment:TTTCTAGCAGCTT---
-TTCTAGAABNTTCTA
 A G C T A C G T A C G T A T G C A C G T C G T A A C T G G T A C C G T A A C T G G T A C A C G T A C G T A C G T A C G T A C G T
A C G T G A C T A G C T G T A C G A C T C T G A A C T G G T C A C T G A A T G C T A C G G A C T A C G T A G T C G A C T C T G A

HSF1/MA0486.2/Jaspar

Match Rank:3
Score:0.71
Offset:1
Orientation:forward strand
Alignment:TTTCTAGCAGCTT-
-TTCTAGAACGTTC
 A G C T A C G T A C G T A T G C A C G T C G T A A C T G G T A C C G T A A C T G G T A C A C G T A C G T A C G T
A C G T C G A T C A G T T A G C A G C T T G C A A C T G G T C A C G T A A G T C T C A G G C A T C G A T A G T C

HSF4/MA0771.1/Jaspar

Match Rank:4
Score:0.70
Offset:1
Orientation:forward strand
Alignment:TTTCTAGCAGCTT-
-TTCTAGAACGTTC
 A G C T A C G T A C G T A T G C A C G T C G T A A C T G G T A C C G T A A C T G G T A C A C G T A C G T A C G T
A C G T C G A T C A G T T A G C A G C T T C G A A T C G G C T A G C T A A G T C T C A G C G A T C G A T A G T C

HRE(HSF)/HepG2-HSF1-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:TTTCTAGCAGCTT--------
-TTCTAGAANNTTCCAGAANN
 A G C T A C G T A C G T A T G C A C G T C G T A A C T G G T A C C G T A A C T G G T A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T A G C A G C T T C G A C T A G G T C A C T G A A T C G T A G C G A C T C A G T A T G C A G T C C T G A A C T G T C G A T C G A A T C G T A C G

Nr2e3/MA0164.1/Jaspar

Match Rank:6
Score:0.60
Offset:7
Orientation:reverse strand
Alignment:TTTCTAGCAGCTT-
-------AAGCTTG
 A G C T A C G T A C G T A T G C A C G T C G T A A C T G G T A C C G T A A C T G G T A C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C T G A T G C A C G T A C G T C T A G

Ascl2/MA0816.1/Jaspar

Match Rank:7
Score:0.56
Offset:5
Orientation:reverse strand
Alignment:TTTCTAGCAGCTT--
-----AGCAGCTGCT
 A G C T A C G T A C G T A T G C A C G T C G T A A C T G G T A C C G T A A C T G G T A C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T G A T C A G T G A C C G T A A C T G T A G C C G A T C A T G A G T C A G C T

PB0155.1_Osr2_2/Jaspar

Match Rank:8
Score:0.55
Offset:-4
Orientation:reverse strand
Alignment:----TTTCTAGCAGCTT
NNTGTAGGTAGCANNT-
 A C G T A C G T A C G T A C G T A G C T A C G T A C G T A T G C A C G T C G T A A C T G G T A C C G T A A C T G G T A C A C G T A C G T
A C T G C T A G C G A T C A T G A G C T C G T A C T A G A C T G C G A T C T G A T A C G A G T C C T G A C T G A C T A G G A C T A C G T

PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer

Match Rank:9
Score:0.55
Offset:0
Orientation:forward strand
Alignment:TTTCTAGCAGCTT--
ADGGYAGYAGCATCT
 A G C T A C G T A C G T A T G C A C G T C G T A A C T G G T A C C G T A A C T G G T A C A C G T A C G T A C G T A C G T
C T G A C G A T C T A G T C A G G A T C C T G A T C A G G A T C C T G A A C T G A G T C G C T A A C G T A G T C G C A T

POL008.1_DCE_S_I/Jaspar

Match Rank:10
Score:0.55
Offset:5
Orientation:reverse strand
Alignment:TTTCTAGCAGCTT
-----NGAAGC--
 A G C T A C G T A C G T A T G C A C G T C G T A A C T G G T A C C G T A A C T G G T A C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T A C G T A C G T G C A T C G A T A C G T G A C A C G T A C G T