Information for 1-CTCTGATGCAYRG (Motif 3)

A G T C A C G T A G T C A C G T A C T G C G T A A C G T A C T G A G T C C G T A A G C T C T G A A C T G
Reverse Opposite:
A G T C A G C T C T G A A C G T C T A G A G T C C G T A A C G T G T A C C G T A A C T G C G T A A C T G
p-value:1e-12
log p-value:-2.956e+01
Information Content per bp:1.919
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif1.15%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets57.7 +/- 16.1bp
Average Position of motif in Background65.9 +/- 20.8bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer

Match Rank:1
Score:0.64
Offset:2
Orientation:forward strand
Alignment:CTCTGATGCAYRG
--MTGATGCAAT-
 A G T C A C G T A G T C A C G T A C T G C G T A A C G T A C T G A G T C C G T A A G C T C T G A A C T G
A C G T A C G T T G C A A G C T C A T G C G T A A G C T A C T G G A T C G T C A C G T A A G C T A C G T

Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer

Match Rank:2
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:CTCTGATGCAYRG
--ATGATGCAAT-
 A G T C A C G T A G T C A C G T A C T G C G T A A C G T A C T G A G T C C G T A A G C T C T G A A C T G
A C G T A C G T T G C A A G C T A C T G C G T A A G C T C A T G G A T C T G C A C G T A A G C T A C G T

PB0084.1_Tcf7l2_1/Jaspar

Match Rank:3
Score:0.61
Offset:-5
Orientation:forward strand
Alignment:-----CTCTGATGCAYRG
ATTTCCTTTGATCTATA-
 A C G T A C G T A C G T A C G T A C G T A G T C A C G T A G T C A C G T A C T G C G T A A C G T A C T G A G T C C G T A A G C T C T G A A C T G
C G T A C G A T C A G T A G C T A G T C A G T C G A C T G A C T C G A T A C T G C G T A C G A T T A G C G C A T C G T A C A G T T G C A A C G T

PB0082.1_Tcf3_1/Jaspar

Match Rank:4
Score:0.61
Offset:-5
Orientation:reverse strand
Alignment:-----CTCTGATGCAYRG
NNTTCCTTTGATCTANA-
 A C G T A C G T A C G T A C G T A C G T A G T C A C G T A G T C A C G T A C T G C G T A A C G T A C T G A G T C C G T A A G C T C T G A A C T G
C G A T C G A T C G A T A G C T A G T C A G T C G C A T G A C T C G A T A T C G C G T A C G A T T A G C G C A T C G T A C G A T C T G A A C G T

CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:5
Score:0.58
Offset:1
Orientation:forward strand
Alignment:CTCTGATGCAYRG
-NATGTTGCAA--
 A G T C A C G T A G T C A C G T A C T G C G T A A C G T A C T G A G T C C G T A A G C T C T G A A C T G
A C G T C T A G T C G A C G A T C T A G G C A T C A G T C T A G G A T C C G T A G T C A A C G T A C G T

PB0040.1_Lef1_1/Jaspar

Match Rank:6
Score:0.58
Offset:-5
Orientation:forward strand
Alignment:-----CTCTGATGCAYRG
AATCCCTTTGATCTATC-
 A C G T A C G T A C G T A C G T A C G T A G T C A C G T A G T C A C G T A C T G C G T A A C G T A C T G A G T C C G T A A G C T C T G A A C T G
C T A G C T G A C G A T A G T C A G T C A G T C G A C T G A C T C G A T A T C G C G T A C G A T T A G C G C A T C G T A C G A T T G A C A C G T

PB0083.1_Tcf7_1/Jaspar

Match Rank:7
Score:0.58
Offset:-5
Orientation:reverse strand
Alignment:-----CTCTGATGCAYRG
NNTTCCTTTGATCTNNA-
 A C G T A C G T A C G T A C G T A C G T A G T C A C G T A G T C A C G T A C T G C G T A A C G T A C T G A G T C C G T A A G C T C T G A A C T G
C G A T C G A T C A G T A G C T A G T C A G T C G C A T G A C T C G A T A T C G C G T A C G A T T A G C G C A T C G T A C G A T T G C A A C G T

Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer

Match Rank:8
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---CTCTGATGCAYRG
TNCCTTTGATGT----
 A C G T A C G T A C G T A G T C A C G T A G T C A C G T A C T G C G T A A C G T A C T G A G T C C G T A A G C T C T G A A C T G
C A G T A T G C A G T C A G T C A G C T A C G T A C G T T A C G C G T A C G A T T A C G G A C T A C G T A C G T A C G T A C G T

PH0148.1_Pou3f3/Jaspar

Match Rank:9
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-CTCTGATGCAYRG---
TNNATTATGCATANNTT
 A C G T A G T C A C G T A G T C A C G T A C T G C G T A A C G T A C T G A G T C C G T A A G C T C T G A A C T G A C G T A C G T A C G T
G C A T G C A T G A C T G T C A C G A T C G A T C G T A A G C T C A T G G T A C C T G A C G A T C T G A G C A T G A C T C G A T C G A T

Hoxa9/MA0594.1/Jaspar

Match Rank:10
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:CTCTGATGCAYRG-
---TGATTTATGGC
 A G T C A C G T A G T C A C G T A C T G C G T A A C G T A C T G A G T C C G T A A G C T C T G A A C T G A C G T
A C G T A C G T A C G T C G A T C T A G G C T A A C G T C G A T A C G T C G T A A G C T C A T G C T A G A T G C