Information for 8-ATATTCACGCGTT (Motif 12)

C T G A G C A T T C G A C G A T A C G T A T G C C G T A G T A C A T C G A G T C A C T G A C G T A C G T
Reverse Opposite:
T C G A C G T A A G T C C T A G A T G C A C T G A C G T A T C G C G T A C G T A A C G T C G T A A G C T
p-value:1e-10
log p-value:-2.394e+01
Information Content per bp:1.739
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.96%
Number of Background Sequences with motif2.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets44.3 +/- 30.3bp
Average Position of motif in Background44.1 +/- 15.1bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Pax6/MA0069.1/Jaspar

Match Rank:1
Score:0.70
Offset:3
Orientation:forward strand
Alignment:ATATTCACGCGTT----
---TTCACGCATGAGTT
 C T G A G C A T T C G A C G A T A C G T A T G C C G T A G T A C A T C G A G T C A C T G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G A C T G A T C G T C A G A T C C A T G A T G C C G T A A G C T A T C G C T G A T A C G A G C T C A G T

EOMES/MA0800.1/Jaspar

Match Rank:2
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:ATATTCACGCGTT
NTTTTCACACCTT
 C T G A G C A T T C G A C G A T A C G T A T G C C G T A G T A C A T C G A G T C A C T G A C G T A C G T
C T G A G C A T C A G T C G A T A G C T T G A C C T G A A G T C T C G A T G A C G A T C G A C T G A C T

TBX21/MA0690.1/Jaspar

Match Rank:3
Score:0.69
Offset:3
Orientation:reverse strand
Alignment:ATATTCACGCGTT
---TTCACACCTT
 C T G A G C A T T C G A C G A T A C G T A T G C C G T A G T A C A T C G A G T C A C T G A C G T A C G T
A C G T A C G T A C G T C G A T A G C T T G A C C T G A G T A C T C G A T G A C G A T C G A C T G A C T

PB0013.1_Eomes_1/Jaspar

Match Rank:4
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-ATATTCACGCGTT---
NNTTTTCACACCTTNNN
 A C G T C T G A G C A T T C G A C G A T A C G T A T G C C G T A G T A C A T C G A G T C A C T G A C G T A C G T A C G T A C G T A C G T
C T G A C T G A C G A T C A G T C A G T A G C T T G A C C T G A A G T C C T G A T A G C G A T C G A C T G A C T C G A T A G C T T G A C

TBR1/MA0802.1/Jaspar

Match Rank:5
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:ATATTCACGCGTT
--TTTCACACCT-
 C T G A G C A T T C G A C G A T A C G T A T G C C G T A G T A C A T C G A G T C A C T G A C G T A C G T
A C G T A C G T C G A T C G A T G A C T T G A C C T G A T A G C T C G A T A G C G A T C G A C T A C G T

TBX2/MA0688.1/Jaspar

Match Rank:6
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:ATATTCACGCGTT
--TTTCACACCTN
 C T G A G C A T T C G A C G A T A C G T A T G C C G T A G T A C A T C G A G T C A C T G A C G T A C G T
A C G T A C G T G C A T G C A T G A C T T G A C C T G A G A T C T C G A T A G C A G T C G A C T G C A T

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:7
Score:0.64
Offset:5
Orientation:reverse strand
Alignment:ATATTCACGCGTT
-----CACGCA--
 C T G A G C A T T C G A C G A T A C G T A T G C C G T A G T A C A T C G A G T C A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A G T C C G T A G T A C C T A G G T A C C T G A A C G T A C G T

TBX20/MA0689.1/Jaspar

Match Rank:8
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:ATATTCACGCGTT
--CTTCACACCTA
 C T G A G C A T T C G A C G A T A C G T A T G C C G T A G T A C A T C G A G T C A C T G A C G T A C G T
A C G T A C G T A G T C G C A T G C A T G T A C G T C A T G A C G T C A G T A C A G T C G A C T G C T A

TBX1/MA0805.1/Jaspar

Match Rank:9
Score:0.62
Offset:4
Orientation:reverse strand
Alignment:ATATTCACGCGTT
----TCACACCT-
 C T G A G C A T T C G A C G A T A C G T A T G C C G T A G T A C A T C G A G T C A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T G A C C T G A A T G C T C G A A G T C A G T C G A C T A C G T

MGA/MA0801.1/Jaspar

Match Rank:10
Score:0.62
Offset:4
Orientation:reverse strand
Alignment:ATATTCACGCGTT
----TCACACCT-
 C T G A G C A T T C G A C G A T A C G T A T G C C G T A G T A C A T C G A G T C A C T G A C G T A C G T
A C G T A C G T A C G T A C G T G A C T T G A C C T G A G A T C T C G A T A G C A G T C G A C T A C G T