Information for 1-GAGGACACTGACCGTC (Motif 1)

A C T G C G T A A C T G A T C G C G T A A G T C C G T A A T G C G C A T T C A G G T C A G T A C A G T C C A T G A G C T A G T C
Reverse Opposite:
A C T G C T G A G T A C C T A G A C T G A C G T A G T C C G T A A T C G G A C T A C T G A C G T A T G C A G T C A C G T A G T C
p-value:1e-14
log p-value:-3.371e+01
Information Content per bp:1.780
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif1.15%
Number of Background Sequences with motif0.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets60.5 +/- 13.0bp
Average Position of motif in Background19.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

FXR(NR),IR1/Liver-FXR-ChIP-Seq(Chong_et_al.)/Homer

Match Rank:1
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:GAGGACACTGACCGTC
NAGGTCANTGACCT--
 A C T G C G T A A C T G A T C G C G T A A G T C C G T A A T G C G C A T T C A G G T C A G T A C A G T C C A T G A G C T A G T C
T C A G T C G A C T A G C A T G A C G T A T G C T C G A G A C T A G C T T A C G T G C A G T A C G T A C A G C T A C G T A C G T

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--GAGGACACTGACCGTC
GGGAGGACNG--------
 A C G T A C G T A C T G C G T A A C T G A T C G C G T A A G T C C G T A A T G C G C A T T C A G G T C A G T A C A G T C C A T G A G C T A G T C
C T A G A C T G A C T G C G T A A C T G A T C G C G T A A T G C A G C T T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ZNF264(Zf)/HEK293-ZNF264.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:3
Score:0.58
Offset:1
Orientation:forward strand
Alignment:GAGGACACTGACCGTC
-RGGGCACTAACY---
 A C T G C G T A A C T G A T C G C G T A A G T C C G T A A T G C G C A T T C A G G T C A G T A C A G T C C A T G A G C T A G T C
A C G T T C G A C A T G C A T G T A C G G T A C T C G A A G T C C A G T C T G A C G T A A G T C G A C T A C G T A C G T A C G T

PB0099.1_Zfp691_1/Jaspar

Match Rank:4
Score:0.56
Offset:-5
Orientation:reverse strand
Alignment:-----GAGGACACTGACCGTC
NNNNTGAGCACTGTNNG----
 A C G T A C G T A C G T A C G T A C G T A C T G C G T A A C T G A T C G C G T A A G T C C G T A A T G C G C A T T C A G G T C A G T A C A G T C C A T G A G C T A G T C
G C T A G A C T C G T A T C A G A C G T A C T G C T G A A C T G A G T C C G T A G T A C A G C T C A T G A G C T C A G T G T A C T C A G A C G T A C G T A C G T A C G T

HINFP/MA0131.2/Jaspar

Match Rank:5
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--GAGGACACTGACCGTC
NCGCGGACGTTG------
 A C G T A C G T A C T G C G T A A C T G A T C G C G T A A G T C C G T A A T G C G C A T T C A G G T C A G T A C A G T C C A T G A G C T A G T C
T G A C G T A C T A C G T A G C C T A G A T C G C G T A T A G C T A C G A G C T A C G T T A C G A C G T A C G T A C G T A C G T A C G T A C G T

PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer

Match Rank:6
Score:0.55
Offset:1
Orientation:forward strand
Alignment:GAGGACACTGACCGTC
-AGGTCTCTAACC---
 A C T G C G T A A C T G A T C G C G T A A G T C C G T A A T G C G C A T T C A G G T C A G T A C A G T C C A T G A G C T A G T C
A C G T C T G A T C A G A C T G C A G T A G T C G A C T A G T C A C G T C G T A G C T A A T G C G A T C A C G T A C G T A C G T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:7
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-GAGGACACTGACCGTC
TRAGGTCA---------
 A C G T A C T G C G T A A C T G A T C G C G T A A G T C C G T A A T G C G C A T T C A G G T C A G T A C A G T C C A T G A G C T A G T C
G C A T T C A G C T G A A T C G A C T G C G A T G A T C C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NR4A2/MA0160.1/Jaspar

Match Rank:8
Score:0.52
Offset:0
Orientation:forward strand
Alignment:GAGGACACTGACCGTC
AAGGTCAC--------
 A C T G C G T A A C T G A T C G C G T A A G T C C G T A A T G C G C A T T C A G G T C A G T A C A G T C C A T G A G C T A G T C
C T G A C T G A A C T G C T A G G A C T A G T C C G T A T G A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Hnf4a/MA0114.3/Jaspar

Match Rank:9
Score:0.51
Offset:-1
Orientation:reverse strand
Alignment:-GAGGACACTGACCGTC
ATTGGACTTTGACCCC-
 A C G T A C T G C G T A A C T G A T C G C G T A A G T C C G T A A T G C G C A T T C A G G T C A G T A C A G T C C A T G A G C T A G T C
C T G A A G C T G A C T T C A G T C A G T G C A T G A C A G C T G A C T A G C T T C A G G T C A G T A C G A T C A G T C A G T C A C G T

GLI2/MA0734.1/Jaspar

Match Rank:10
Score:0.50
Offset:-2
Orientation:forward strand
Alignment:--GAGGACACTGACCGTC
GCGACCACACTG------
 A C G T A C G T A C T G C G T A A C T G A T C G C G T A A G T C C G T A A T G C G C A T T C A G G T C A G T A C A G T C C A T G A G C T A G T C
C T A G T G A C C A T G T G C A A G T C A T G C G T C A A T G C T G C A G T A C C G A T C T A G A C G T A C G T A C G T A C G T A C G T A C G T