Information for 4-YGCASKGCGTGMVSYT (Motif 5)

G A C T T A C G A G T C T G C A T A G C C A T G C A T G T A G C A C T G G A C T A C T G G T C A T G A C A T C G G A C T C A G T
Reverse Opposite:
G T C A C T G A T A G C A C T G A C G T G T A C C G T A T G A C A T C G G T A C G T A C A T C G A C G T A C T G A T G C C T G A
p-value:1e-12
log p-value:-2.842e+01
Information Content per bp:1.567
Number of Target Sequences with motif34.0
Percentage of Target Sequences with motif3.89%
Number of Background Sequences with motif398.8
Percentage of Background Sequences with motif0.84%
Average Position of motif in Targets54.3 +/- 28.0bp
Average Position of motif in Background48.8 +/- 31.1bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:1
Score:0.59
Offset:5
Orientation:forward strand
Alignment:YGCASKGCGTGMVSYT
-----TGCGTG-----
 G A C T T A C G A G T C T G C A T A G C C A T G C A T G T A G C A C T G G A C T A C T G G T C A T G A C A T C G G A C T C A G T
A C G T A C G T A C G T A C G T A C G T G A C T A C T G A G T C A C T G A C G T A C T G A C G T A C G T A C G T A C G T A C G T

HIF-1a(bHLH)/MCF7-HIF1a-ChIP-Seq(GSE28352)/Homer

Match Rank:2
Score:0.58
Offset:5
Orientation:forward strand
Alignment:YGCASKGCGTGMVSYT
-----TACGTGCV---
 G A C T T A C G A G T C T G C A T A G C C A T G C A T G T A G C A C T G G A C T A C T G G T C A T G A C A T C G G A C T C A G T
A C G T A C G T A C G T A C G T A C G T A C G T C T G A G A T C A T C G G A C T T C A G G T A C T A G C A C G T A C G T A C G T

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:3
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:YGCASKGCGTGMVSYT
----TTGCGTGCVA--
 G A C T T A C G A G T C T G C A T A G C C A T G C A T G T A G C A C T G G A C T A C T G G T C A T G A C A T C G G A C T C A G T
A C G T A C G T A C G T A C G T A C G T C A G T A C T G A G T C T C A G C G A T C A T G G T A C T A G C C G T A A C G T A C G T

ARNT::HIF1A/MA0259.1/Jaspar

Match Rank:4
Score:0.57
Offset:4
Orientation:forward strand
Alignment:YGCASKGCGTGMVSYT
----GGACGTGC----
 G A C T T A C G A G T C T G C A T A G C C A T G C A T G T A G C A C T G G A C T A C T G G T C A T G A C A T C G G A C T C A G T
A C G T A C G T A C G T A C G T T A C G A C T G T C G A A G T C A C T G A C G T A C T G T A G C A C G T A C G T A C G T A C G T

PB0199.1_Zfp161_2/Jaspar

Match Rank:5
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-YGCASKGCGTGMVSYT
NNGCNCTGCGCGGC---
 A C G T G A C T T A C G A G T C T G C A T A G C C A T G C A T G T A G C A C T G G A C T A C T G G T C A T G A C A T C G G A C T C A G T
T C G A A G T C C A T G G A T C T G C A G A T C C A G T A C T G A G T C C T A G A T G C C T A G C T A G G T A C A C G T A C G T A C G T

HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer

Match Rank:6
Score:0.55
Offset:4
Orientation:forward strand
Alignment:YGCASKGCGTGMVSYT
----RTACGTGC----
 G A C T T A C G A G T C T G C A T A G C C A T G C A T G T A G C A C T G G A C T A C T G G T C A T G A C A T C G G A C T C A G T
A C G T A C G T A C G T A C G T C T G A C A G T C T G A A G T C C T A G G A C T A T C G G T A C A C G T A C G T A C G T A C G T

HIF2a(bHLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer

Match Rank:7
Score:0.50
Offset:2
Orientation:reverse strand
Alignment:YGCASKGCGTGMVSYT
--GGGTACGTGC----
 G A C T T A C G A G T C T G C A T A G C C A T G C A T G T A G C A C T G G A C T A C T G G T C A T G A C A T C G G A C T C A G T
A C G T A C G T C T A G A T C G T C A G C A G T C T G A A T G C A C T G A G C T A C T G G T A C A C G T A C G T A C G T A C G T

PB0180.1_Sp4_2/Jaspar

Match Rank:8
Score:0.49
Offset:1
Orientation:forward strand
Alignment:YGCASKGCGTGMVSYT
-CAAAGGCGTGGCCAG
 G A C T T A C G A G T C T G C A T A G C C A T G C A T G T A G C A C T G G A C T A C T G G T C A T G A C A T C G G A C T C A G T
A C G T A G T C C G T A C G T A T C G A A T C G A C T G G T A C A C T G A C G T C T A G A C T G G A T C G A T C G T C A C A T G

NR4A2/MA0160.1/Jaspar

Match Rank:9
Score:0.49
Offset:8
Orientation:reverse strand
Alignment:YGCASKGCGTGMVSYT
--------GTGACCTT
 G A C T T A C G A G T C T G C A T A G C C A T G C A T G T A G C A C T G G A C T A C T G G T C A T G A C A T C G G A C T C A G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T C T A G C G T A A G T C G T A C A G C T A G C T

PAX5(Paired,Homeobox)/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer

Match Rank:10
Score:0.48
Offset:-2
Orientation:forward strand
Alignment:--YGCASKGCGTGMVSYT
GCAGCCAAGCGTGACN--
 A C G T A C G T G A C T T A C G A G T C T G C A T A G C C A T G C A T G T A G C A C T G G A C T A C T G G T C A T G A C A T C G G A C T C A G T
A C T G G A T C C T G A A T C G A G T C T A G C C T G A C G T A T A C G A G T C C T A G C A G T T C A G T C G A T G A C G A T C A C G T A C G T