Information for 3-CCTACTGTGTGYC (Motif 3)

A G T C A G T C A G C T C T G A A G T C C G A T C T A G A C G T A C T G A G C T A C T G A G T C A T G C
Reverse Opposite:
T A C G T C A G G T A C C T G A A G T C C G T A A G T C C G T A A C T G A G C T T C G A A C T G A C T G
p-value:1e-19
log p-value:-4.430e+01
Information Content per bp:1.818
Number of Target Sequences with motif17.0
Percentage of Target Sequences with motif1.95%
Number of Background Sequences with motif30.5
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets49.9 +/- 25.2bp
Average Position of motif in Background44.9 +/- 28.1bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0205.1_Zic1_2/Jaspar

Match Rank:1
Score:0.71
Offset:-3
Orientation:reverse strand
Alignment:---CCTACTGTGTGYC
TNTCCTGCTGTGNNG-
 A C G T A C G T A C G T A G T C A G T C A G C T C T G A A G T C C G A T C T A G A C G T A C T G A G C T A C T G A G T C A T G C
G C A T A G T C C A G T T G A C G T A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G C A T C A T G T C A G A C G T

PB0207.1_Zic3_2/Jaspar

Match Rank:2
Score:0.69
Offset:-3
Orientation:reverse strand
Alignment:---CCTACTGTGTGYC
NNTCCTGCTGTGNNN-
 A C G T A C G T A C G T A G T C A G T C A G C T C T G A A G T C C G A T C T A G A C G T A C T G A G C T A C T G A G T C A T G C
G C A T A T C G C A G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G G A C T A C T G G A T C G C A T G T A C A C G T

PB0206.1_Zic2_2/Jaspar

Match Rank:3
Score:0.67
Offset:-3
Orientation:reverse strand
Alignment:---CCTACTGTGTGYC
TCNCCTGCTGNGNNN-
 A C G T A C G T A C G T A G T C A G T C A G C T C T G A A G T C C G A T C T A G A C G T A C T G A G C T A C T G A G T C A T G C
G C A T A G T C A C G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G A C T C A T G C T A G A C G T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:4
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---CCTACTGTGTGYC
CCCCCTGCTGTG----
 A C G T A C G T A C G T A G T C A G T C A G C T C T G A A G T C C G A T C T A G A C G T A C T G A G C T A C T G A G T C A T G C
G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G A C G T A C G T A C G T A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:5
Score:0.64
Offset:-5
Orientation:forward strand
Alignment:-----CCTACTGTGTGYC
GGCCYCCTGCTGDGH---
 A C G T A C G T A C G T A C G T A C G T A G T C A G T C A G C T C T G A A G T C C G A T C T A G A C G T A C T G A G C T A C T G A G T C A T G C
C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C A C G T A C G T A C G T

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:6
Score:0.64
Offset:0
Orientation:forward strand
Alignment:CCTACTGTGTGYC
CCTGCTGAGH---
 A G T C A G T C A G C T C T G A A G T C C G A T C T A G A C G T A C T G A G C T A C T G A G T C A T G C
A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A A C G T A C G T A C G T

PB0168.1_Sox14_2/Jaspar

Match Rank:7
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--CCTACTGTGTGYC
NNNCCATTGTGTNAN
 A C G T A C G T A G T C A G T C A G C T C T G A A G T C C G A T C T A G A C G T A C T G A G C T A C T G A G T C A T G C
A T C G T G A C A C T G A G T C G A T C C G T A A C G T A C G T T A C G G C A T A T C G A G C T T C A G T G C A T C A G

PB0050.1_Osr1_1/Jaspar

Match Rank:8
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----CCTACTGTGTGYC
TNNTGCTACTGTNNNN-
 A C G T A C G T A C G T A C G T A G T C A G T C A G C T C T G A A G T C C G A T C T A G A C G T A C T G A G C T A C T G A G T C A T G C
G A C T C G A T A C G T C G A T T C A G A G T C A G C T G C T A A G T C A G C T C T A G A C G T C G T A G C T A C G T A C G A T A C G T

PB0051.1_Osr2_1/Jaspar

Match Rank:9
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----CCTACTGTGTGYC
CNNNGCTACTGTANNN-
 A C G T A C G T A C G T A C G T A G T C A G T C A G C T C T G A A G T C C G A T C T A G A C G T A C T G A G C T A C T G A G T C A T G C
G A T C C G A T A C G T C G A T T C A G A G T C A G C T G C T A A G T C A G C T C A T G A C G T C G T A A G T C C G T A C G A T A C G T

SOX10/MA0442.1/Jaspar

Match Rank:10
Score:0.59
Offset:4
Orientation:forward strand
Alignment:CCTACTGTGTGYC
----CTTTGT---
 A G T C A G T C A G C T C T G A A G T C C G A T C T A G A C G T A C T G A G C T A C T G A G T C A T G C
A C G T A C G T A C G T A C G T A G T C C G A T A C G T A C G T A T C G A C G T A C G T A C G T A C G T