Information for 4-ATGAAGTGTGCACTTT (Motif 9)

G T C A C A G T A T C G G T C A G C T A A C T G G A C T A T C G A C G T A T C G G T A C G C T A A G T C A C G T A C G T A C G T
Reverse Opposite:
C G T A G T C A C G T A C T A G C A G T C A T G T A G C C G T A A T G C C G T A T A G C C A G T C A G T A T G C G T C A A C G T
p-value:1e-10
log p-value:-2.519e+01
Information Content per bp:1.733
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.62%
Number of Background Sequences with motif1.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets54.7 +/- 14.8bp
Average Position of motif in Background44.1 +/- 9.7bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0146.1_Mafk_2/Jaspar

Match Rank:1
Score:0.60
Offset:5
Orientation:reverse strand
Alignment:ATGAAGTGTGCACTTT----
-----CCTTGCAATTTTTNN
 G T C A C A G T A T C G G T C A G C T A A C T G G A C T A T C G A C G T A T C G G T A C G C T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A G T C T A G C C A G T A C G T C T A G G T A C C T G A G T C A C G A T C G A T G A C T G A C T A G C T C A G T A G T C

PB0134.1_Hnf4a_2/Jaspar

Match Rank:2
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:ATGAAGTGTGCACTTT----
----NNATTGGACTTTNGNN
 G T C A C A G T A T C G G T C A G C T A A C T G G A C T A T C G A C G T A T C G G T A C G C T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G A T C A G T G C T A C A G T G A C T C T A G C A T G G T C A G T A C A G C T G A C T G C A T C A G T C T A G T G A C T G A C

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:3
Score:0.55
Offset:8
Orientation:reverse strand
Alignment:ATGAAGTGTGCACTTT--------
--------TGGACTTTGNNCTNTG
 G T C A C A G T A T C G G T C A G C T A A C T G G A C T A T C G A C G T A T C G G T A C G C T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T C T A G T C G A G T A C G A T C G A C T A G T C C G A T C A T G

HNF4G/MA0484.1/Jaspar

Match Rank:4
Score:0.55
Offset:8
Orientation:reverse strand
Alignment:ATGAAGTGTGCACTTT-------
--------TGGACTTTGNNCTCN
 G T C A C A G T A T C G G T C A G C T A A C T G G A C T A T C G A C G T A T C G G T A C G C T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T T C A G T C A G G T C A G A T C G A C T A G T C G C A T

PB0053.1_Rara_1/Jaspar

Match Rank:5
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:ATGAAGTGTGCACTTT----
----NNNGTGACCTTTGNNN
 G T C A C A G T A T C G G T C A G C T A A C T G G A C T A T C G A C G T A T C G G T A C G C T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G T A C C G T A A T C G C T A G A G C T T C A G G T C A G T A C G T A C A G C T A G C T C G A T C A T G T C G A C A T G G T C A

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:6
Score:0.54
Offset:8
Orientation:forward strand
Alignment:ATGAAGTGTGCACTTT----
--------TGACCTTTNCNT
 G T C A C A G T A T C G G T C A G C T A A C T G G A C T A T C G A C G T A T C G G T A C G C T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G C G T A A G T C G T A C A C G T A C G T A C G T G T C A G T A C T G A C G A C T

PB0104.1_Zscan4_1/Jaspar

Match Rank:7
Score:0.54
Offset:2
Orientation:forward strand
Alignment:ATGAAGTGTGCACTTT---
--TACATGTGCACATAAAA
 G T C A C A G T A T C G G T C A G C T A A C T G G A C T A T C G A C G T A T C G G T A C G C T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C A G T G T C A T G A C C T G A C G A T T C A G A G C T C T A G A G T C C T G A A G T C G C T A A G C T G C T A G C T A C G T A G T C A

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.54
Offset:7
Orientation:reverse strand
Alignment:ATGAAGTGTGCACTTT-
-------CTGACCTTTG
 G T C A C A G T A T C G G T C A G C T A A C T G G A C T A T C G A C G T A T C G G T A C G C T A A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C A C G T T A C G T G C A G T A C A G T C G A C T A G C T A C G T T C A G

OCT:OCT-short(POU,Homeobox)/NPC-OCT6-ChIP-Seq(GSE43916)/Homer

Match Rank:9
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--ATGAAGTGTGCACTTT
WYATGCATWATGCAT---
 A C G T A C G T G T C A C A G T A T C G G T C A G C T A A C T G G A C T A T C G A C G T A T C G G T A C G C T A A G T C A C G T A C G T A C G T
C G T A A G C T C G T A A C G T A C T G G T A C C G T A A C G T C G A T C G T A A C G T A C T G A G T C C G T A C G A T A C G T A C G T A C G T

PB0026.1_Gm397_1/Jaspar

Match Rank:10
Score:0.52
Offset:2
Orientation:forward strand
Alignment:ATGAAGTGTGCACTTT---
--CAGATGTGCACATACGT
 G T C A C A G T A T C G G T C A G C T A A C T G G A C T A T C G A C G T A T C G G T A C G C T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G T A C G C T A C A T G C G T A C G A T T A C G A G C T C T A G A G T C C T G A A T G C G C T A A G C T G T C A G T A C C A T G G A C T