Information for 4-SGCGSGGGGGMTT (Motif 3)

A T C G A C T G A G T C A C T G A T G C A C T G C T A G A C T G A C T G C T A G G T A C A C G T A C G T
Reverse Opposite:
C G T A C G T A A C T G A G T C A G T C A G T C A G T C A G T C A T C G A G T C A C T G A G T C A T G C
p-value:1e-16
log p-value:-3.709e+01
Information Content per bp:1.890
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.86%
Number of Background Sequences with motif1.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets39.9 +/- 21.7bp
Average Position of motif in Background54.7 +/- 4.7bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.29
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GLIS2/MA0736.1/Jaspar

Match Rank:1
Score:0.69
Offset:-3
Orientation:reverse strand
Alignment:---SGCGSGGGGGMTT
CTTCGCGGGGGGTC--
 A C G T A C G T A C G T A T C G A C T G A G T C A C T G A T G C A C T G C T A G A C T G A C T G C T A G G T A C A C G T A C G T
T A G C C A G T G A C T G A T C T C A G G A T C C T A G C A T G A C T G C T A G C A T G C T A G A G C T T G A C A C G T A C G T

PB0204.1_Zfp740_2/Jaspar

Match Rank:2
Score:0.68
Offset:-3
Orientation:reverse strand
Alignment:---SGCGSGGGGGMTT-
ANTNCCGGGGGGAANTT
 A C G T A C G T A C G T A T C G A C T G A G T C A C T G A T G C A C T G C T A G A C T G A C T G C T A G G T A C A C G T A C G T A C G T
C T G A A G T C G A C T G A C T T A G C A T G C T A C G T A C G A C T G C T A G C T A G C T A G C G T A G T C A G A C T G A C T G A C T

ZNF740/MA0753.1/Jaspar

Match Rank:3
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:SGCGSGGGGGMTT
-GTGGGGGGGG--
 A T C G A C T G A G T C A C T G A T G C A C T G C T A G A C T G A C T G C T A G G T A C A C G T A C G T
A C G T C T A G C A G T C A T G A C T G T C A G C T A G C T A G C A T G C A T G A C T G A C G T A C G T

PH0122.1_Obox2/Jaspar

Match Rank:4
Score:0.64
Offset:2
Orientation:forward strand
Alignment:SGCGSGGGGGMTT------
--TGAGGGGGATTAACTAT
 A T C G A C T G A G T C A C T G A T G C A C T G C T A G A C T G A C T G C T A G G T A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C G A T A C T G T C G A C T A G C T A G C T A G C T A G C A T G G T C A C A G T G C A T C G T A C G T A G T A C C G A T G T C A G A C T

PB0164.1_Smad3_2/Jaspar

Match Rank:5
Score:0.63
Offset:-6
Orientation:reverse strand
Alignment:------SGCGSGGGGGMTT
NAGANTGGCGGGGNGNA--
 A C G T A C G T A C G T A C G T A C G T A C G T A T C G A C T G A G T C A C T G A T G C A C T G C T A G A C T G A C T G C T A G G T A C A C G T A C G T
T G A C C T G A T C A G C T G A C A T G A C G T C A T G T C A G A T G C T A C G A T C G T C A G C T A G T A G C C A T G C A G T G T C A A C G T A C G T

Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.63
Offset:1
Orientation:forward strand
Alignment:SGCGSGGGGGMTT
-GGGGGGGG----
 A T C G A C T G A G T C A C T G A T G C A C T G C T A G A C T G A C T G C T A G G T A C A C G T A C G T
A C G T C T A G A C T G C T A G T C A G T C A G T A C G C T A G A C T G A C G T A C G T A C G T A C G T

Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer

Match Rank:7
Score:0.63
Offset:0
Orientation:forward strand
Alignment:SGCGSGGGGGMTT
TGCGTGGGYG---
 A T C G A C T G A G T C A C T G A T G C A C T G C T A G A C T G A C T G C T A G G T A C A C G T A C G T
C A G T T C A G G A T C A C T G A C G T C T A G A C T G A C T G G A C T C T A G A C G T A C G T A C G T

PH0139.1_Pitx3/Jaspar

Match Rank:8
Score:0.62
Offset:4
Orientation:forward strand
Alignment:SGCGSGGGGGMTT-------
----AGGGGGATTAGCTGCC
 A T C G A C T G A G T C A C T G A T G C A C T G C T A G A C T G A C T G C T A G G T A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T C G A C T A G T A C G C T A G C T A G A C T G G T C A A G C T G A C T C G T A C A T G A T G C A C G T C T A G A T G C A T G C

PH0123.1_Obox3/Jaspar

Match Rank:9
Score:0.62
Offset:2
Orientation:forward strand
Alignment:SGCGSGGGGGMTT------
--TGAGGGGGATTAACTAT
 A T C G A C T G A G T C A C T G A T G C A C T G C T A G A C T G A C T G C T A G G T A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G C A T A T C G T C G A T A C G C T A G C T A G C T A G C A T G G C T A A C G T G A C T C G T A C G T A G T A C C G A T G T C A G A C T

ZIC4/MA0751.1/Jaspar

Match Rank:10
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----SGCGSGGGGGMTT
NCNCAGCGGGGGGTC--
 A C G T A C G T A C G T A C G T A T C G A C T G A G T C A C T G A T G C A C T G C T A G A C T G A C T G C T A G G T A C A C G T A C G T
C A T G T G A C C T G A G A T C G T C A T C A G G A T C C T A G C A T G C A T G C A T G C A T G C A T G A G C T T G A C A C G T A C G T