Information for 10-TTTATGATAA (Motif 20)

A C G T A C G T A C G T G C T A C A G T T C A G G T C A C A G T C G T A C G T A
Reverse Opposite:
C G A T G C A T G T C A C A G T A G T C G T C A C G A T C G T A C G T A G T C A
p-value:1e-6
log p-value:-1.599e+01
Information Content per bp:1.825
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif1.85%
Number of Background Sequences with motif154.8
Percentage of Background Sequences with motif0.32%
Average Position of motif in Targets46.2 +/- 28.2bp
Average Position of motif in Background52.4 +/- 31.4bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HOXC10/MA0905.1/Jaspar

Match Rank:1
Score:0.72
Offset:-2
Orientation:reverse strand
Alignment:--TTTATGATAA
NTTTTACGAC--
 A C G T A C G T A C G T A C G T A C G T G C T A C A G T T C A G G T C A C A G T C G T A C G T A
C G T A C G A T G C A T G C A T C G A T C G T A G A T C C A T G C T G A A G T C A C G T A C G T

CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer

Match Rank:2
Score:0.71
Offset:-3
Orientation:reverse strand
Alignment:---TTTATGATAA
DGWTTTATGRCN-
 A C G T A C G T A C G T A C G T A C G T A C G T G C T A C A G T T C A G G T C A C A G T C G T A C G T A
C A G T C A T G G C A T C G A T C G A T C G A T C T G A A G C T C A T G C T A G A G T C A T G C A C G T

Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer

Match Rank:3
Score:0.71
Offset:-2
Orientation:reverse strand
Alignment:--TTTATGATAA
NTTTTATGAC--
 A C G T A C G T A C G T A C G T A C G T G C T A C A G T T C A G G T C A C A G T C G T A C G T A
C T G A C G A T A C G T A C G T A C G T C G T A A C G T C A T G C T G A A G T C A C G T A C G T

CDX1/MA0878.1/Jaspar

Match Rank:4
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-TTTATGATAA
TTTTATTGC--
 A C G T A C G T A C G T A C G T G C T A C A G T T C A G G T C A C A G T C G T A C G T A
C A G T C G A T G C A T C G A T C G T A A G C T C A G T C T A G A G T C A C G T A C G T

PB0187.1_Tcf7_2/Jaspar

Match Rank:5
Score:0.70
Offset:-3
Orientation:reverse strand
Alignment:---TTTATGATAA--
NNNTTTNTAATACNG
 A C G T A C G T A C G T A C G T A C G T A C G T G C T A C A G T T C A G G T C A C A G T C G T A C G T A A C G T A C G T
C G A T C A G T C T A G C A G T C A G T C G A T T G C A A G C T G T C A C G T A C G A T C G T A G T A C T C A G C A T G

HOXD11/MA0908.1/Jaspar

Match Rank:6
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--TTTATGATAA
NTTTTACGAC--
 A C G T A C G T A C G T A C G T A C G T G C T A C A G T T C A G G T C A C A G T C G T A C G T A
C G A T C G A T C G A T C G A T C G A T C G T A A G T C C T A G C G T A A G T C A C G T A C G T

POU3F1/MA0786.1/Jaspar

Match Rank:7
Score:0.69
Offset:1
Orientation:forward strand
Alignment:TTTATGATAA---
-TTATGCAAATTA
 A C G T A C G T A C G T G C T A C A G T T C A G G T C A C A G T C G T A C G T A A C G T A C G T A C G T
A C G T C G A T G C A T C T G A G A C T C A T G A G T C C G T A C G T A C G T A C G A T C A G T G C T A

POU3F2/MA0787.1/Jaspar

Match Rank:8
Score:0.68
Offset:1
Orientation:forward strand
Alignment:TTTATGATAA---
-TTATGCAAATTA
 A C G T A C G T A C G T G C T A C A G T T C A G G T C A C A G T C G T A C G T A A C G T A C G T A C G T
A C G T C G A T G C A T T C G A G A C T C A T G A G T C G C T A C G T A G C T A C G A T A C G T G C T A

POU3F3/MA0788.1/Jaspar

Match Rank:9
Score:0.68
Offset:0
Orientation:forward strand
Alignment:TTTATGATAA---
ATTATGCTAATTT
 A C G T A C G T A C G T G C T A C A G T T C A G G T C A C A G T C G T A C G T A A C G T A C G T A C G T
C G T A C G A T C G A T C G T A A C G T C A T G A G T C G C A T C G T A C T G A G C A T C G A T C G A T

PH0068.1_Hoxc13/Jaspar

Match Rank:10
Score:0.67
Offset:-4
Orientation:reverse strand
Alignment:----TTTATGATAA--
NAATTTTACGAGNTNN
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C T A C A G T T C A G G T C A C A G T C G T A C G T A A C G T A C G T
G C T A C T G A C G T A C G A T C G A T C G A T C G A T C T G A G A T C C T A G C T G A A T C G T G A C C G A T C G A T C G A T