Information for 11-AAGGGAATTTCTG (Motif 16)

C G T A C G T A A C T G A C T G A C T G C G T A C G T A A C G T A C G T A C G T A G T C A G C T A T C G
Reverse Opposite:
A T G C C T G A A C T G C G T A C G T A C G T A C G A T A C G T A G T C A G T C A G T C A C G T A C G T
p-value:1e-8
log p-value:-1.941e+01
Information Content per bp:1.945
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.59%
Number of Background Sequences with motif3.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets35.6 +/- 22.7bp
Average Position of motif in Background69.0 +/- 15.0bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:1
Score:0.78
Offset:2
Orientation:reverse strand
Alignment:AAGGGAATTTCTG
--GGGAATTTCC-
 C G T A C G T A A C T G A C T G A C T G C G T A C G T A A C G T A C G T A C G T A G T C A G C T A T C G
A C G T A C G T A C T G C T A G A C T G C T G A T C G A C G A T A G C T C G A T G T A C G T A C A C G T

RELA/MA0107.1/Jaspar

Match Rank:2
Score:0.74
Offset:2
Orientation:forward strand
Alignment:AAGGGAATTTCTG
--GGGAATTTCC-
 C G T A C G T A A C T G A C T G A C T G C G T A C G T A A C G T A C G T A C G T A G T C A G C T A T C G
A C G T A C G T A T C G A C T G A C T G C T G A T C G A C G A T A C G T A G C T A G T C A G T C A C G T

MF0003.1_REL_class/Jaspar

Match Rank:3
Score:0.70
Offset:2
Orientation:forward strand
Alignment:AAGGGAATTTCTG
--GGGGATTTCC-
 C G T A C G T A A C T G A C T G A C T G C G T A C G T A A C G T A C G T A C G T A G T C A G C T A T C G
A C G T A C G T A T C G A C T G C A T G C T A G G C T A C G A T A G C T G A C T G A T C G T A C A C G T

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:4
Score:0.66
Offset:1
Orientation:forward strand
Alignment:AAGGGAATTTCTG
-NGGGGATTTCCC
 C G T A C G T A A C T G A C T G A C T G C G T A C G T A A C G T A C G T A C G T A G T C A G C T A T C G
A C G T C G T A C A T G C A T G A C T G C T A G T C G A G C A T C G A T A G C T A G T C G A T C G T A C

REL/MA0101.1/Jaspar

Match Rank:5
Score:0.65
Offset:2
Orientation:forward strand
Alignment:AAGGGAATTTCTG
--GGGGATTTCC-
 C G T A C G T A A C T G A C T G A C T G C G T A C G T A A C G T A C G T A C G T A G T C A G C T A T C G
A C G T A C G T A T C G A C T G C A T G C T A G G T C A C G A T C G A T C G A T A G T C G T A C A C G T

HOXA5/MA0158.1/Jaspar

Match Rank:6
Score:0.60
Offset:5
Orientation:reverse strand
Alignment:AAGGGAATTTCTG
-----AATTAGTG
 C G T A C G T A A C T G A C T G A C T G C G T A C G T A A C G T A C G T A C G T A G T C A G C T A T C G
A C G T A C G T A C G T A C G T A C G T T G C A C G T A A G C T C G A T G C T A T A C G G A C T A C T G

TEAD4/MA0809.1/Jaspar

Match Rank:7
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:AAGGGAATTTCTG
-NTGGAATGTN--
 C G T A C G T A A C T G A C T G A C T G C G T A C G T A A C G T A C G T A C G T A G T C A G C T A T C G
A C G T C T G A G C A T C T A G T C A G G C T A C G T A G C A T A C T G G A C T A C T G A C G T A C G T

TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer

Match Rank:8
Score:0.58
Offset:0
Orientation:forward strand
Alignment:AAGGGAATTTCTG
NCTGGAATGC---
 C G T A C G T A A C T G A C T G A C T G C G T A C G T A A C G T A C G T A C G T A G T C A G C T A T C G
G A T C G T A C C G A T A C T G A C T G C G T A C G T A A C G T A C T G G A T C A C G T A C G T A C G T

GFY(?)/Promoter/Homer

Match Rank:9
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:AAGGGAATTTCTG-
--GGGAATTGTAGT
 C G T A C G T A A C T G A C T G A C T G C G T A C G T A A C G T A C G T A C G T A G T C A G C T A T C G A C G T
A C G T A C G T C A T G T C A G T C A G T C G A T C G A G C A T A C G T A C T G A C G T C T G A A T C G A C G T

PH0007.1_Barx1/Jaspar

Match Rank:10
Score:0.56
Offset:0
Orientation:forward strand
Alignment:AAGGGAATTTCTG---
AAAGTAATTAGTGAAT
 C G T A C G T A A C T G A C T G A C T G C G T A C G T A A C G T A C G T A C G T A G T C A G C T A T C G A C G T A C G T A C G T
G T C A G T C A T C G A T A C G G A C T T G C A G T C A A C G T A C G T C T G A A T C G A G C T C A T G G C T A C G T A G C A T