Information for 11-GAGGTGTAGT (Motif 13)

A C T G C G T A T A C G C T A G C G A T A C T G C A G T C T G A A C T G C G A T
Reverse Opposite:
C G T A A G T C A G C T G T C A A G T C C G T A G A T C A T G C A C G T A G T C
p-value:1e-8
log p-value:-2.054e+01
Information Content per bp:1.853
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif1.65%
Number of Background Sequences with motif86.6
Percentage of Background Sequences with motif0.18%
Average Position of motif in Targets41.5 +/- 19.2bp
Average Position of motif in Background54.5 +/- 26.3bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GFY(?)/Promoter/Homer

Match Rank:1
Score:0.73
Offset:-2
Orientation:reverse strand
Alignment:--GAGGTGTAGT
GGGAATTGTAGT
 A C G T A C G T A C T G C G T A T A C G C T A G C G A T A C T G C A G T C T G A A C T G C G A T
C A T G T C A G T C A G T C G A T C G A G C A T A C G T A C T G A C G T C T G A A T C G A C G T

PB0117.1_Eomes_2/Jaspar

Match Rank:2
Score:0.71
Offset:-3
Orientation:forward strand
Alignment:---GAGGTGTAGT---
GCGGAGGTGTCGCCTC
 A C G T A C G T A C G T A C T G C G T A T A C G C T A G C G A T A C T G C A G T C T G A A C T G C G A T A C G T A C G T A C G T
T A C G A T C G T C A G C T A G C T G A T A C G A T C G A G C T T C A G C G A T G A T C A C T G T A G C A G T C A G C T T A G C

Ronin(THAP)/ES-Thap11-ChIP-Seq(GSE51522)/Homer

Match Rank:3
Score:0.70
Offset:-9
Orientation:reverse strand
Alignment:---------GAGGTGTAGT-
GCMTBCTGGGAGTTGTAGTY
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A T A C G C T A G C G A T A C T G C A G T C T G A A C T G C G A T A C G T
C A T G T A G C G T A C A G C T A C G T T G A C A G C T C T A G A C T G C T A G C G T A T C A G G C A T A G C T A C T G C G A T C T G A A C T G A C G T A G T C

GFY-Staf(?,Zf)/Promoter/Homer

Match Rank:4
Score:0.66
Offset:-9
Orientation:reverse strand
Alignment:---------GAGGTGTAGT-
GCATTCTGGGAATTGTAGTT
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A T A C G C T A G C G A T A C T G C A G T C T G A A C T G C G A T A C G T
T C A G T A G C G T C A A G C T A C G T A G T C A G C T A C T G A C T G C T A G C G T A C T G A C G A T A G C T A C T G A C G T C T G A A C T G A C G T A G C T

TBX5/MA0807.1/Jaspar

Match Rank:5
Score:0.62
Offset:1
Orientation:forward strand
Alignment:GAGGTGTAGT
-AGGTGTGA-
 A C T G C G T A T A C G C T A G C G A T A C T G C A G T C T G A A C T G C G A T
A C G T C T G A T C A G A C T G A C G T C T A G A G C T A C T G C T G A A C G T

ID4/MA0824.1/Jaspar

Match Rank:6
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--GAGGTGTAGT
GACAGGTGTN--
 A C G T A C G T A C T G C G T A T A C G C T A G C G A T A C T G C A G T C T G A A C T G C G A T
C T A G T C G A A G T C C G T A A T C G A T C G A G C T A C T G A G C T G T C A A C G T A C G T

TBX4/MA0806.1/Jaspar

Match Rank:7
Score:0.60
Offset:1
Orientation:forward strand
Alignment:GAGGTGTAGT
-AGGTGTGA-
 A C T G C G T A T A C G C T A G C G A T A C T G C A G T C T G A A C T G C G A T
A C G T C T G A T C A G T A C G A G C T A C T G G A C T A C T G C T G A A C G T

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:8
Score:0.59
Offset:1
Orientation:forward strand
Alignment:GAGGTGTAGT
-AGGTGTCA-
 A C T G C G T A T A C G C T A G C G A T A C T G C A G T C T G A A C T G C G A T
A C G T C T G A C T A G A T C G A G C T A C T G G A C T A G T C C T G A A C G T

TBX15/MA0803.1/Jaspar

Match Rank:9
Score:0.58
Offset:1
Orientation:forward strand
Alignment:GAGGTGTAGT
-AGGTGTGA-
 A C T G C G T A T A C G C T A G C G A T A C T G C A G T C T G A A C T G C G A T
A C G T C T G A C T A G T C A G A C G T A T C G A G C T A C T G C T G A A C G T

TCF3/MA0522.2/Jaspar

Match Rank:10
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--GAGGTGTAGT
NNCAGGTGTN--
 A C G T A C G T A C T G C G T A T A C G C T A G C G A T A C T G C A G T C T G A A C T G C G A T
G T C A T C A G A G T C C G T A A T C G T A C G C G A T A C T G A G C T C A G T A C G T A C G T