Information for 10-ATGCCAGCTC (Motif 12)

C T G A C G A T C T A G A T G C A T G C C G T A T A C G T G A C A G C T G T A C
Reverse Opposite:
A C T G C T G A A C T G A T G C A C G T A T C G A T C G G A T C C G T A G A C T
p-value:1e-9
log p-value:-2.120e+01
Information Content per bp:1.829
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif1.77%
Number of Background Sequences with motif97.9
Percentage of Background Sequences with motif0.21%
Average Position of motif in Targets35.9 +/- 21.5bp
Average Position of motif in Background45.1 +/- 27.8bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hic1/MA0739.1/Jaspar

Match Rank:1
Score:0.77
Offset:0
Orientation:forward strand
Alignment:ATGCCAGCTC
ATGCCAACC-
 C T G A C G A T C T A G A T G C A T G C C G T A T A C G T G A C A G C T G T A C
T C G A A G C T T C A G T A G C G T A C G T C A T C G A A T G C A G T C A C G T

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:2
Score:0.72
Offset:0
Orientation:reverse strand
Alignment:ATGCCAGCTC
ATGCCAGACN
 C T G A C G A T C T A G A T G C A T G C C G T A T A C G T G A C A G C T G T A C
C G T A G C A T C A T G T A G C A G T C C G T A C T A G C G T A G A T C T A G C

PB0029.1_Hic1_1/Jaspar

Match Rank:3
Score:0.70
Offset:-3
Orientation:forward strand
Alignment:---ATGCCAGCTC---
ACTATGCCAACCTACC
 A C G T A C G T A C G T C T G A C G A T C T A G A T G C A T G C C G T A T A C G T G A C A G C T G T A C A C G T A C G T A C G T
C G T A A G T C A C G T C T G A A C G T C T A G A T G C A G T C G T C A T G C A A G T C A G T C G C A T C T G A G A T C G A T C

PH0169.1_Tgif1/Jaspar

Match Rank:4
Score:0.68
Offset:-4
Orientation:forward strand
Alignment:----ATGCCAGCTC---
GATATTGACAGCTGCGT
 A C G T A C G T A C G T A C G T C T G A C G A T C T A G A T G C A T G C C G T A T A C G T G A C A G C T G T A C A C G T A C G T A C G T
C A G T C T G A A C G T C G T A C G A T C G A T A C T G C G T A A G T C C T G A C T A G A T G C A C G T T A C G T A G C A C T G C G A T

PH0102.1_Meis1/Jaspar

Match Rank:5
Score:0.68
Offset:-3
Orientation:reverse strand
Alignment:---ATGCCAGCTC---
NTATTGACAGCTNNTT
 A C G T A C G T A C G T C T G A C G A T C T A G A T G C A T G C C G T A T A C G T G A C A G C T G T A C A C G T A C G T A C G T
C T A G A C G T C G T A C G A T A C G T A C T G C G T A A G T C C T G A A C T G A T G C G A C T T A G C A T C G G C A T G C A T

Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer

Match Rank:6
Score:0.67
Offset:1
Orientation:forward strand
Alignment:ATGCCAGCTC
-TGTCANYT-
 C T G A C G A T C T A G A T G C A T G C C G T A T A C G T G A C A G C T G T A C
A C G T A G C T C A T G G C A T G A T C T G C A C T A G G A T C A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:7
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-ATGCCAGCTC
CGTGCCAAG--
 A C G T C T G A C G A T C T A G A T G C A T G C C G T A T A C G T G A C A G C T G T A C
T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T A C G T

PH0140.1_Pknox1/Jaspar

Match Rank:8
Score:0.67
Offset:-3
Orientation:reverse strand
Alignment:---ATGCCAGCTC---
GGATTGACAGGTCNTT
 A C G T A C G T A C G T C T G A C G A T C T A G A T G C A T G C C G T A T A C G T G A C A G C T G T A C A C G T A C G T A C G T
A C T G A C T G C G T A C G A T A C G T C T A G C G T A A G T C C T G A A C T G A T C G G A C T T A G C A C G T G A C T G C A T

HIC2/MA0738.1/Jaspar

Match Rank:9
Score:0.66
Offset:0
Orientation:forward strand
Alignment:ATGCCAGCTC
ATGCCCACC-
 C T G A C G A T C T A G A T G C A T G C C G T A T A C G T G A C A G C T G T A C
T C G A A G C T T C A G T G A C G T A C G T A C T C G A T A G C A G T C A C G T

NFIC/MA0161.1/Jaspar

Match Rank:10
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:ATGCCAGCTC
-TGCCAA---
 C T G A C G A T C T A G A T G C A T G C C G T A T A C G T G A C A G C T G T A C
A C G T G C A T C A T G G A T C A G T C G T C A C T G A A C G T A C G T A C G T