Information for 14-TRGCGACAAG (Motif 17)

A C G T C T G A A C T G A G T C A T C G C G T A A G T C C G T A C T G A A C T G
Reverse Opposite:
A G T C A G C T A C G T A C T G A C G T A T G C A C T G A G T C A G C T C G T A
p-value:1e-7
log p-value:-1.718e+01
Information Content per bp:1.907
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.97%
Number of Background Sequences with motif27.4
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets49.1 +/- 22.4bp
Average Position of motif in Background41.6 +/- 28.0bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZBED1/MA0749.1/Jaspar

Match Rank:1
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---TRGCGACAAG
CTATCGCGACATA
 A C G T A C G T A C G T A C G T C T G A A C T G A G T C A T C G C G T A A G T C C G T A C T G A A C T G
G T A C C G A T T C G A G A C T A G T C T C A G G A T C T A C G T C G A G A T C G C T A A C G T C T G A

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---TRGCGACAAG
SCCTAGCAACAG-
 A C G T A C G T A C G T A C G T C T G A A C T G A G T C A T C G C G T A A G T C C G T A C T G A A C T G
A T G C A G T C G T A C A G C T T C G A C T A G G A T C C T G A G T C A A G T C G C T A T C A G A C G T

PB0113.1_E2F3_2/Jaspar

Match Rank:3
Score:0.66
Offset:-5
Orientation:reverse strand
Alignment:-----TRGCGACAAG--
NNNNTTGGCGCCGANNN
 A C G T A C G T A C G T A C G T A C G T A C G T C T G A A C T G A G T C A T C G C G T A A G T C C G T A C T G A A C T G A C G T A C G T
T A C G T A G C A C G T G A C T A C G T G C A T C T A G A T C G G T A C A C T G A T G C A G T C C T A G G C T A C T A G A T G C C A G T

PB0112.1_E2F2_2/Jaspar

Match Rank:4
Score:0.65
Offset:-5
Orientation:reverse strand
Alignment:-----TRGCGACAAG--
NNNNTTGGCGCCGANNN
 A C G T A C G T A C G T A C G T A C G T A C G T C T G A A C T G A G T C A T C G C G T A A G T C C G T A C T G A A C T G A C G T A C G T
T A G C T G A C A G C T A G C T C A G T G A C T C T A G A T C G G T A C A C T G T A G C G A T C C T A G G C T A T C G A A T C G C A T G

E2F1/MA0024.3/Jaspar

Match Rank:5
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--TRGCGACAAG
TTTGGCGCCAAA
 A C G T A C G T A C G T C T G A A C T G A G T C A T C G C G T A A G T C C G T A C T G A A C T G
G C A T C G A T C G A T T A C G A T C G A G T C A T C G T A G C A G T C G T C A G C T A C G T A

PB0056.1_Rfxdc2_1/Jaspar

Match Rank:6
Score:0.60
Offset:-5
Orientation:forward strand
Alignment:-----TRGCGACAAG
CCGCATAGCAACGGA
 A C G T A C G T A C G T A C G T A C G T A C G T C T G A A C T G A G T C A T C G C G T A A G T C C G T A C T G A A C T G
A G T C A G T C T A C G A T G C G C T A G A C T T C G A C T A G G A T C C T G A T C G A A G T C T A C G T C A G C T G A

SCRT1/MA0743.1/Jaspar

Match Rank:7
Score:0.60
Offset:0
Orientation:forward strand
Alignment:TRGCGACAAG-----
GAGCAACAGGTGGTT
 A C G T C T G A A C T G A G T C A T C G C G T A A G T C C G T A C T G A A C T G A C G T A C G T A C G T A C G T A C G T
T C A G G C T A A C T G G A T C G T C A C G T A G T A C C G T A C T A G A C T G A G C T C A T G A C T G A G C T G A C T

PB0054.1_Rfx3_1/Jaspar

Match Rank:8
Score:0.60
Offset:-9
Orientation:forward strand
Alignment:---------TRGCGACAAG----
TGTGACCCTTAGCAACCGATTAA
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A A C T G A G T C A T C G C G T A A G T C C G T A C T G A A C T G A C G T A C G T A C G T A C G T
G A C T C A T G A G C T A T C G G T C A G A T C T G A C A T G C G A C T A G C T T C G A C T A G G A T C C T G A C G T A A G T C T A G C T C A G C G T A G C A T G C A T G C T A G C T A

SCRT2/MA0744.1/Jaspar

Match Rank:9
Score:0.60
Offset:0
Orientation:forward strand
Alignment:TRGCGACAAG---
ATGCAACAGGTGG
 A C G T C T G A A C T G A G T C A T C G C G T A A G T C C G T A C T G A A C T G A C G T A C G T A C G T
T C G A G C A T A C T G G T A C T G C A C G T A G T A C G T C A T C A G A T C G G C A T C A T G A T C G

PB0055.1_Rfx4_1/Jaspar

Match Rank:10
Score:0.59
Offset:-5
Orientation:forward strand
Alignment:-----TRGCGACAAG
TACCATAGCAACGGT
 A C G T A C G T A C G T A C G T A C G T A C G T C T G A A C T G A G T C A T C G C G T A A G T C C G T A C T G A A C T G
A G C T G T C A T A G C A T G C G T C A A G C T T C G A C T A G G A T C C T G A C T G A A G T C T A C G T C A G C G A T