Information for 7-AGAGCCTGGCCGG (Motif 12)

C G T A A C T G C G T A A C T G A T G C A G T C A G C T A C T G A C T G A G T C G T A C C T A G A C T G
Reverse Opposite:
A G T C A G T C A C T G C T A G A G T C G T A C C T G A A C T G A T C G A G T C G A C T A G T C A C G T
p-value:1e-11
log p-value:-2.685e+01
Information Content per bp:1.810
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.73%
Number of Background Sequences with motif2.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets35.3 +/- 21.4bp
Average Position of motif in Background66.3 +/- 10.6bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Klf12/MA0742.1/Jaspar

Match Rank:1
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----AGAGCCTGGCCGG
NANAAGGGCGTGGTC--
 A C G T A C G T A C G T A C G T C G T A A C T G C G T A A C T G A T G C A G T C A G C T A C T G A C T G A G T C G T A C C T A G A C T G
C G T A C G T A C G A T C G T A C G T A C T A G T C A G C T A G G A T C C A T G A C G T A T C G C A T G A G C T G T A C A C G T A C G T

Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer

Match Rank:2
Score:0.56
Offset:0
Orientation:forward strand
Alignment:AGAGCCTGGCCGG--
GGGGCTYGKCTGGGA
 C G T A A C T G C G T A A C T G A T G C A G T C A G C T A C T G A C T G A G T C G T A C C T A G A C T G A C G T A C G T
C T A G C A T G C A T G T A C G A G T C G C A T A G C T C T A G A C G T A G T C G A C T A C T G A C T G A C T G T C G A

PB0164.1_Smad3_2/Jaspar

Match Rank:3
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:AGAGCCTGGCCGG-----
-NAGANTGGCGGGGNGNA
 C G T A A C T G C G T A A C T G A T G C A G T C A G C T A C T G A C T G A G T C G T A C C T A G A C T G A C G T A C G T A C G T A C G T A C G T
A C G T T G A C C T G A T C A G C T G A C A T G A C G T C A T G T C A G A T G C T A C G A T C G T C A G C T A G T A G C C A T G C A G T G T C A

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:4
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---AGAGCCTGGCCGG
TTGAGTGSTT------
 A C G T A C G T A C G T C G T A A C T G C G T A A C T G A T G C A G T C A G C T A C T G A C T G A G T C G T A C C T A G A C T G
G C A T A C G T C T A G C G T A C A T G C G A T C T A G A T C G G A C T G A C T A C G T A C G T A C G T A C G T A C G T A C G T

ZNF322(Zf)/HEK293-ZNF322.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:5
Score:0.53
Offset:-11
Orientation:forward strand
Alignment:-----------AGAGCCTGGCCGG
GAGCCTGGTACTGWGCCTGR----
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G C G T A A C T G A T G C A G T C A G C T A C T G A C T G A G T C G T A C C T A G A C T G
T A C G C T G A C A T G G A T C G T A C G C A T T C A G T A C G A G C T G T C A G A T C G C A T T A C G C G T A C T A G G A T C G A T C C G A T A C T G T C A G A C G T A C G T A C G T A C G T

KLF6(Zf)/PDAC-KLF6-ChIP-Seq(GSE64557)/Homer

Match Rank:6
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-AGAGCCTGGCCGG
MKGGGYGTGGCC--
 A C G T C G T A A C T G C G T A A C T G A T G C A G T C A G C T A C T G A C T G A G T C G T A C C T A G A C T G
G T A C C A G T A C T G A C T G A C T G G A T C A C T G A C G T A C T G A C T G A G T C G A T C A C G T A C G T

Klf4/MA0039.2/Jaspar

Match Rank:7
Score:0.51
Offset:0
Orientation:forward strand
Alignment:AGAGCCTGGCCGG
TGGGTGGGGC---
 C G T A A C T G C G T A A C T G A T G C A G T C A G C T A C T G A C T G A G T C G T A C C T A G A C T G
C G A T T C A G C T A G A T C G G A C T C A T G A C T G C T A G A C T G A G T C A C G T A C G T A C G T

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:8
Score:0.51
Offset:-4
Orientation:forward strand
Alignment:----AGAGCCTGGCCGG
BTBRAGTGSN-------
 A C G T A C G T A C G T A C G T C G T A A C T G C G T A A C T G A T G C A G T C A G C T A C T G A C T G A G T C G T A C C T A G A C T G
A T G C G A C T A G C T C T A G C G T A C T A G C G A T C T A G A T C G G A T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:9
Score:0.51
Offset:-4
Orientation:reverse strand
Alignment:----AGAGCCTGGCCGG
CTYRAGTGSY-------
 A C G T A C G T A C G T A C G T C G T A A C T G C G T A A C T G A T G C A G T C A G C T A C T G A C T G A G T C G T A C C T A G A C T G
A T G C G C A T A G C T C T A G C G T A A C T G C G A T C T A G A T G C G A T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:10
Score:0.51
Offset:-4
Orientation:reverse strand
Alignment:----AGAGCCTGGCCGG
CTTGAGTGGCT------
 A C G T A C G T A C G T A C G T C G T A A C T G C G T A A C T G A T G C A G T C A G C T A C T G A C T G A G T C G T A C C T A G A C T G
A T G C G A C T C A G T C T A G C G T A A C T G C G A T A C T G A T C G G A T C G A C T A C G T A C G T A C G T A C G T A C G T A C G T