Information for 8-GGGGAAAGTC (Motif 13)

C T A G A C T G A C T G C A T G C T G A C G T A C T G A C T A G G A C T A T G C
Reverse Opposite:
A T C G C T G A A G T C A G C T G C A T A G C T G T A C G T A C A G T C A G T C
p-value:1e-8
log p-value:-1.975e+01
Information Content per bp:1.827
Number of Target Sequences with motif17.0
Percentage of Target Sequences with motif2.04%
Number of Background Sequences with motif151.2
Percentage of Background Sequences with motif0.31%
Average Position of motif in Targets49.6 +/- 31.4bp
Average Position of motif in Background50.1 +/- 25.7bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MZF1/MA0056.1/Jaspar

Match Rank:1
Score:0.72
Offset:-1
Orientation:forward strand
Alignment:-GGGGAAAGTC
TGGGGA-----
 A C G T C T A G A C T G A C T G C A T G C T G A C G T A C T G A C T A G G A C T A T G C
A G C T A C T G C T A G A C T G A C T G C T G A A C G T A C G T A C G T A C G T A C G T

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.70
Offset:-3
Orientation:reverse strand
Alignment:---GGGGAAAGTC
GAAAGTGAAAGT-
 A C G T A C G T A C G T C T A G A C T G A C T G C A T G C T G A C G T A C T G A C T A G G A C T A T G C
T C A G C G T A T G C A C T G A C T A G C G A T C T A G G C T A T C G A C G T A A C T G A G C T A C G T

RELA/MA0107.1/Jaspar

Match Rank:3
Score:0.69
Offset:2
Orientation:reverse strand
Alignment:GGGGAAAGTC--
--GGAAATTCCC
 C T A G A C T G A C T G C A T G C T G A C G T A C T G A C T A G G A C T A T G C A C G T A C G T
A C G T A C G T A C T G A C T G C T G A C G T A C G T A A G C T A G C T A G T C G T A C T A G C

ZNF467(Zf)/HEK293-ZNF467.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-GGGGAAAGTC-
TGGGGAAGGGCM
 A C G T C T A G A C T G A C T G C A T G C T G A C G T A C T G A C T A G G A C T A T G C A C G T
G A C T C T A G C T A G C T A G A C T G T C G A C T G A C T A G C T A G C T A G G T A C G T C A

REL/MA0101.1/Jaspar

Match Rank:5
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:GGGGAAAGTC--
--GGAAANCCCC
 C T A G A C T G A C T G C A T G C T G A C G T A C T G A C T A G G A C T A T G C A C G T A C G T
A C G T A C G T A C T G C T A G C G T A C G T A C G T A A C G T G A T C G A T C T A G C T A G C

Hnf4a/MA0114.3/Jaspar

Match Rank:6
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--GGGGAAAGTC----
GGGGTCAAAGTCCAAT
 A C G T A C G T C T A G A C T G A C T G C A T G C T G A C G T A C T G A C T A G G A C T A T G C A C G T A C G T A C G T A C G T
T C A G T C A G C T A G C A T G C A G T A G T C T C G A C T G A C T G A A C T G A C G T A G T C A G T C C T G A T C G A G A C T

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:7
Score:0.64
Offset:2
Orientation:forward strand
Alignment:GGGGAAAGTC--
--GGAAATTCCC
 C T A G A C T G A C T G C A T G C T G A C G T A C T G A C T A G G A C T A T G C A C G T A C G T
A C G T A C G T A C T G C A T G G C T A T C G A G C T A A G C T A G C T G T A C A G T C T G A C

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:8
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:GGGGAAAGTC---
-GGGAAATCCCCN
 C T A G A C T G A C T G C A T G C T G A C G T A C T G A C T A G G A C T A T G C A C G T A C G T A C G T
A C G T C A T G C T A G C T A G C T G A G C T A C G T A A G C T G A T C G T A C G T A C G T A C G C A T

PRDM1/MA0508.1/Jaspar

Match Rank:9
Score:0.64
Offset:-4
Orientation:forward strand
Alignment:----GGGGAAAGTC-
AGAAAGTGAAAGTGA
 A C G T A C G T A C G T A C G T C T A G A C T G A C T G C A T G C T G A C G T A C T G A C T A G G A C T A T G C A C G T
C G T A C T A G C T G A T C G A C T G A C T A G C A G T C T A G C G T A C T G A C G T A T C A G A C G T C T A G C T G A

PB0134.1_Hnf4a_2/Jaspar

Match Rank:10
Score:0.63
Offset:0
Orientation:forward strand
Alignment:GGGGAAAGTC------
GGCAAAAGTCCAATAA
 C T A G A C T G A C T G C A T G C T G A C G T A C T G A C T A G G A C T A T G C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G A T C G T A C C G T A C T G A C T G A A C T G A C G T G T A C A G T C C T G A G T C A C G A T G T C A G C A T