Information for 7-TGAAATWAAARTAYAT (Motif 21)

A C G T T A C G G C T A T C G A T C G A A C G T C G A T C T G A T C G A C G T A C T G A G C A T C T G A G A C T G C T A C G A T
Reverse Opposite:
G C T A C G A T C T G A G A C T C G T A G A C T A C G T A G C T G A C T G C T A T G C A A G C T A G C T C G A T A T G C C G T A
p-value:1e-9
log p-value:-2.155e+01
Information Content per bp:1.604
Number of Target Sequences with motif27.0
Percentage of Target Sequences with motif3.32%
Number of Background Sequences with motif367.0
Percentage of Background Sequences with motif0.76%
Average Position of motif in Targets49.1 +/- 25.6bp
Average Position of motif in Background51.7 +/- 27.2bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0075.1_Hoxd10/Jaspar

Match Rank:1
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--TGAAATWAAARTAYAT
AATGCAATAAAATTTAT-
 A C G T A C G T A C G T T A C G G C T A T C G A T C G A A C G T C G A T C T G A T C G A C G T A C T G A G C A T C T G A G A C T G C T A C G A T
T G C A C T G A A C G T T C A G G A T C G T C A C G T A A G C T C G T A C G T A C G T A T C G A G A C T C G A T C G A T C G T A G C A T A C G T

Hoxd9/MA0913.1/Jaspar

Match Rank:2
Score:0.62
Offset:1
Orientation:forward strand
Alignment:TGAAATWAAARTAYAT
-GCAATAAAAA-----
 A C G T T A C G G C T A T C G A T C G A A C G T C G A T C T G A T C G A C G T A C T G A G C A T C T G A G A C T G C T A C G A T
A C G T T C A G G A T C T G C A C T G A C G A T G C T A G C T A G C T A C G T A G C T A A C G T A C G T A C G T A C G T A C G T

HOXA10/MA0899.1/Jaspar

Match Rank:3
Score:0.57
Offset:0
Orientation:forward strand
Alignment:TGAAATWAAARTAYAT
GGTAATAAAAA-----
 A C G T T A C G G C T A T C G A T C G A A C G T C G A T C T G A T C G A C G T A C T G A G C A T C T G A G A C T G C T A C G A T
C T A G T C A G G A C T T G C A T C G A G C A T C G T A C G T A G T C A G T C A G T C A A C G T A C G T A C G T A C G T A C G T

PH0046.1_Hoxa10/Jaspar

Match Rank:4
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--TGAAATWAAARTAYAT
TAGGTAATAAAATTCA--
 A C G T A C G T A C G T T A C G G C T A T C G A T C G A A C G T C G A T C T G A T C G A C G T A C T G A G C A T C T G A G A C T G C T A C G A T
C A G T G T C A A C T G T C A G G A C T G T C A C T G A G C A T C G T A C G T A G C T A G C T A G C A T C A G T G T A C C G T A A C G T A C G T

PH0056.1_Hoxa9/Jaspar

Match Rank:5
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--TGAAATWAAARTAYAT
ACGGCCATAAAATTAAT-
 A C G T A C G T A C G T T A C G G C T A T C G A T C G A A C G T C G A T C T G A T C G A C G T A C T G A G C A T C T G A G A C T G C T A C G A T
C T G A T G A C C T A G A T C G G A T C G T A C C T G A C G A T G C T A C G T A C G T A C G T A G C A T C A G T C G T A C T G A C G A T A C G T

HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer

Match Rank:6
Score:0.57
Offset:0
Orientation:forward strand
Alignment:TGAAATWAAARTAYAT
NCYAATAAAA------
 A C G T T A C G G C T A T C G A T C G A A C G T C G A T C T G A T C G A C G T A C T G A G C A T C T G A G A C T G C T A C G A T
C G A T T A G C G A C T G T C A C G T A A C G T C G T A C G T A C G T A G C T A A C G T A C G T A C G T A C G T A C G T A C G T

Arid3a/MA0151.1/Jaspar

Match Rank:7
Score:0.57
Offset:4
Orientation:forward strand
Alignment:TGAAATWAAARTAYAT
----ATTAAA------
 A C G T T A C G G C T A T C G A T C G A A C G T C G A T C T G A T C G A C G T A C T G A G C A T C T G A G A C T G C T A C G A T
A C G T A C G T A C G T A C G T C G T A A C G T G A C T C G T A C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T

PH0078.1_Hoxd13/Jaspar

Match Rank:8
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--TGAAATWAAARTAYAT
CTACCAATAAAATTCT--
 A C G T A C G T A C G T T A C G G C T A T C G A T C G A A C G T C G A T C T G A T C G A C G T A C T G A G C A T C T G A G A C T G C T A C G A T
G T A C C G A T G C T A A G T C G A T C G C T A C G T A A G C T C G T A C G T A C G T A G C T A G A C T G A C T G T A C G A C T A C G T A C G T

HOXD13/MA0909.1/Jaspar

Match Rank:9
Score:0.56
Offset:1
Orientation:forward strand
Alignment:TGAAATWAAARTAYAT
-CCAATAAAAA-----
 A C G T T A C G G C T A T C G A T C G A A C G T C G A T C T G A T C G A C G T A C T G A G C A T C T G A G A C T G C T A C G A T
A C G T A T G C G A T C G T C A C G T A A G C T C G T A G C T A G T C A G T C A G T C A A C G T A C G T A C G T A C G T A C G T

PU.1:IRF8(ETS:IRF)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer

Match Rank:10
Score:0.56
Offset:0
Orientation:forward strand
Alignment:TGAAATWAAARTAYAT
GGAAGTGAAAST----
 A C G T T A C G G C T A T C G A T C G A A C G T C G A T C T G A T C G A C G T A C T G A G C A T C T G A G A C T G C T A C G A T
C T A G C T A G C G T A C G T A T A C G C G A T C T A G C T G A C T G A C G T A T A C G G A C T A C G T A C G T A C G T A C G T