Information for 6-CTTCATCCTTCAGAAC (Motif 13)

A G T C C G A T A G C T A G T C C G T A A C G T A G T C A G T C A G C T A C G T A G T C C G T A A C T G C G T A G T C A G T A C
Reverse Opposite:
A C T G A C G T A C G T A G T C A C G T A C T G C G T A C T G A C T A G A C T G C G T A A C G T C T A G C T G A C G T A A C T G
p-value:1e-10
log p-value:-2.523e+01
Information Content per bp:1.911
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.61%
Number of Background Sequences with motif1.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets48.4 +/- 16.0bp
Average Position of motif in Background73.4 +/- 0.5bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZSCAN22(Zf)/HEK293-ZSCAN22.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-CTTCATCCTTCAGAAC---
GCCTCCTCCMTCWGACTGKS
 A C G T A G T C C G A T A G C T A G T C C G T A A C G T A G T C A G T C A G C T A C G T A G T C C G T A A C T G C G T A G T C A G T A C A C G T A C G T A C G T
T A C G G A T C G A T C G A C T A G T C A G T C G C A T A G T C A G T C G T A C A G C T A G T C G C T A T C A G C T G A A G T C G A C T T A C G A C T G T A G C

HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson_et_al.)/Homer

Match Rank:2
Score:0.56
Offset:1
Orientation:forward strand
Alignment:CTTCATCCTTCAGAAC
-GYCATCMATCAT---
 A G T C C G A T A G C T A G T C C G T A A C G T A G T C A G T C A G C T A C G T A G T C C G T A A C T G C G T A G T C A G T A C
A C G T T A C G G A C T T G A C C G T A A C G T G A T C G T C A C G T A A C G T A T G C C G T A G A C T A C G T A C G T A C G T

ZFP3(Zf)/HEK293-ZFP3.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:3
Score:0.55
Offset:-7
Orientation:reverse strand
Alignment:-------CTTCATCCTTCAGAAC--
AACTCCTAYTCATCCTTCAAAACCC
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G A T A G C T A G T C C G T A A C G T A G T C A G T C A G C T A C G T A G T C C G T A A C T G C G T A G T C A G T A C A C G T A C G T
C G T A C T G A A G T C A C G T A G T C A G T C A C G T C G T A A G C T C G A T A G T C C G T A G A C T A G T C A G T C G A C T C A G T A G T C G T C A C T G A C T G A C T G A G T A C A G T C A G T C

STAT6(Stat)/Macrophage-Stat6-ChIP-Seq(GSE38377)/Homer

Match Rank:4
Score:0.54
Offset:5
Orientation:forward strand
Alignment:CTTCATCCTTCAGAAC
-----TTCCKNAGAA-
 A G T C C G A T A G C T A G T C C G T A A C G T A G T C A G T C A G C T A C G T A G T C C G T A A C T G C G T A G T C A G T A C
A C G T A C G T A C G T A C G T A C G T G A C T C A G T G A T C G A T C A C G T G A T C C T G A T A C G C G T A G T C A A C G T

Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer

Match Rank:5
Score:0.54
Offset:2
Orientation:forward strand
Alignment:CTTCATCCTTCAGAAC
--TCATCAATCA----
 A G T C C G A T A G C T A G T C C G T A A C G T A G T C A G T C A G C T A C G T A G T C C G T A A C T G C G T A G T C A G T A C
A C G T A C G T G A C T G T A C T G C A A C G T G A T C G C T A T C G A A C G T A G T C C G T A A C G T A C G T A C G T A C G T

STAT6(Stat)/CD4-Stat6-ChIP-Seq(GSE22104)/Homer

Match Rank:6
Score:0.53
Offset:5
Orientation:reverse strand
Alignment:CTTCATCCTTCAGAAC-
-----TTCTNNAGAANT
 A G T C C G A T A G C T A G T C C G T A A C G T A G T C A G T C A G C T A C G T A G T C C G T A A C T G C G T A G T C A G T A C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C G A C T A G C T C T G A C T G A C T A G C G T A C G T A T C G A G A C T

Stat6/MA0520.1/Jaspar

Match Rank:7
Score:0.53
Offset:2
Orientation:forward strand
Alignment:CTTCATCCTTCAGAAC-
--CATTTCCTGAGAAAT
 A G T C C G A T A G C T A G T C C G T A A C G T A G T C A G T C A G C T A C G T A G T C C G T A A C T G C G T A G T C A G T A C A C G T
A C G T A C G T A T G C C G T A A G C T A C G T C G A T G T A C G A T C C G A T T A C G C T G A C A T G C G T A C T G A T G C A G A C T

PB0194.1_Zbtb12_2/Jaspar

Match Rank:8
Score:0.52
Offset:4
Orientation:forward strand
Alignment:CTTCATCCTTCAGAAC---
----TATCATTAGAACGCT
 A G T C C G A T A G C T A G T C C G T A A C G T A G T C A G T C A G C T A C G T A G T C C G T A A C T G C G T A G T C A G T A C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G C A T T G C A G A C T A T G C T C G A C G A T C A G T C T G A C A T G G C T A G T C A G T A C A C T G A G T C C G A T

PBX1/MA0070.1/Jaspar

Match Rank:9
Score:0.52
Offset:2
Orientation:forward strand
Alignment:CTTCATCCTTCAGAAC
--CCATCAATCAAA--
 A G T C C G A T A G C T A G T C C G T A A C G T A G T C A G T C A G C T A C G T A G T C C G T A A C T G C G T A G T C A G T A C
A C G T A C G T G A T C A G T C T C G A G A C T A G T C G T C A C G T A A C G T A G T C G C T A C G T A C G T A A C G T A C G T

SA0002.1_at_AC_acceptor/Jaspar

Match Rank:10
Score:0.51
Offset:-4
Orientation:forward strand
Alignment:----CTTCATCCTTCAGAAC
TTTTTTTTTTTTTTCAGGTT
 A C G T A C G T A C G T A C G T A G T C C G A T A G C T A G T C C G T A A C G T A G T C A G T C A G C T A C G T A G T C C G T A A C T G C G T A G T C A G T A C
G A C T A G C T A G C T G A C T G A C T A G C T A G C T A G C T A G C T G A C T G A C T G A C T G A C T G A C T G A T C C G T A A C T G T C A G G C A T C G A T