Information for 14-TGGAGCCARA (Motif 12)

A C G T A T C G A C T G C G T A A C T G A G T C G T A C C G T A T C A G C T G A
Reverse Opposite:
A G C T A G T C A C G T A C T G A C T G A G T C C G A T G T A C T A G C T G C A
p-value:1e-10
log p-value:-2.529e+01
Information Content per bp:1.762
Number of Target Sequences with motif34.0
Percentage of Target Sequences with motif4.18%
Number of Background Sequences with motif488.0
Percentage of Background Sequences with motif1.01%
Average Position of motif in Targets41.6 +/- 28.3bp
Average Position of motif in Background49.9 +/- 29.1bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFIX/MA0671.1/Jaspar

Match Rank:1
Score:0.77
Offset:1
Orientation:forward strand
Alignment:TGGAGCCARA
-CGTGCCAAG
 A C G T A T C G A C T G C G T A A C T G A G T C G T A C C G T A T C A G C T G A
A C G T T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G

NFIC/MA0161.1/Jaspar

Match Rank:2
Score:0.74
Offset:3
Orientation:reverse strand
Alignment:TGGAGCCARA
---TGCCAA-
 A C G T A T C G A C T G C G T A A C T G A G T C G T A C C G T A T C A G C T G A
A C G T A C G T A C G T G C A T C A T G G A T C A G T C G T C A C T G A A C G T

E2F1/MA0024.3/Jaspar

Match Rank:3
Score:0.71
Offset:-2
Orientation:forward strand
Alignment:--TGGAGCCARA
TTTGGCGCCAAA
 A C G T A C G T A C G T A T C G A C T G C G T A A C T G A G T C G T A C C G T A T C A G C T G A
G C A T C G A T C G A T T A C G A T C G A G T C A T C G T A G C A G T C G T C A G C T A C G T A

PB0113.1_E2F3_2/Jaspar

Match Rank:4
Score:0.70
Offset:-4
Orientation:forward strand
Alignment:----TGGAGCCARA---
AGCTCGGCGCCAAAAGC
 A C G T A C G T A C G T A C G T A C G T A T C G A C T G C G T A A C T G A G T C G T A C C G T A T C A G C T G A A C G T A C G T A C G T
G T A C A T C G G A C T C G A T G A T C C T A G A T C G G T A C C A T G T A G C G A T C C G T A G T C A C T G A T G C A A T C G A T G C

PB0112.1_E2F2_2/Jaspar

Match Rank:5
Score:0.70
Offset:-4
Orientation:forward strand
Alignment:----TGGAGCCARA---
CCTTCGGCGCCAAAAGG
 A C G T A C G T A C G T A C G T A C G T A T C G A C T G C G T A A C T G A G T C G T A C C G T A T C A G C T G A A C G T A C G T A C G T
G A T C T A C G A G C T C G A T G A T C C T A G A T C G T G A C C A T G T A G C G A T C C T G A G T C A C T G A T C G A A C T G A T C G

POL013.1_MED-1/Jaspar

Match Rank:6
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:TGGAGCCARA
CGGAGC----
 A C G T A T C G A C T G C G T A A C T G A G T C G T A C C G T A T C A G C T G A
A T G C A C T G A C T G C G T A A C T G A G T C A C G T A C G T A C G T A C G T

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:7
Score:0.68
Offset:2
Orientation:reverse strand
Alignment:TGGAGCCARA--
--ATGCCAGACN
 A C G T A T C G A C T G C G T A A C T G A G T C G T A C C G T A T C A G C T G A A C G T A C G T
A C G T A C G T C G T A G C A T C A T G T A G C A G T C C G T A C T A G C G T A G A T C T A G C

ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:8
Score:0.68
Offset:-5
Orientation:forward strand
Alignment:-----TGGAGCCARA
GRTGMTRGAGCC---
 A C G T A C G T A C G T A C G T A C G T A C G T A T C G A C T G C G T A A C T G A G T C G T A C C G T A T C A G C T G A
A T C G T C G A G A C T A T C G T G A C A C G T C T A G A C T G C G T A A C T G A G T C G T A C A C G T A C G T A C G T

NFIA/MA0670.1/Jaspar

Match Rank:9
Score:0.66
Offset:1
Orientation:forward strand
Alignment:TGGAGCCARA-
-GGTGCCAAGT
 A C G T A T C G A C T G C G T A A C T G A G T C G T A C C G T A T C A G C T G A A C G T
A C G T T C A G C A T G A C G T A C T G A G T C A G T C C G T A C G T A T C A G C G A T

POL010.1_DCE_S_III/Jaspar

Match Rank:10
Score:0.66
Offset:2
Orientation:forward strand
Alignment:TGGAGCCARA
--CAGCC---
 A C G T A T C G A C T G C G T A A C T G A G T C G T A C C G T A T C A G C T G A
A C G T A C G T T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T