Information for 8-TSMGGTYTKCCAG (Motif 11)

A C G T A T C G G T C A A C T G A C T G A C G T A G C T A C G T A C G T G T A C A G T C C G T A A C T G
Reverse Opposite:
A G T C A C G T A C T G A C T G G T C A C G T A C T G A C G T A A G T C G T A C A C G T A T G C G T C A
p-value:1e-11
log p-value:-2.594e+01
Information Content per bp:1.873
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.86%
Number of Background Sequences with motif5.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets45.6 +/- 19.9bp
Average Position of motif in Background49.7 +/- 15.5bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFATC2/MA0152.1/Jaspar

Match Rank:1
Score:0.67
Offset:5
Orientation:forward strand
Alignment:TSMGGTYTKCCAG
-----TTTTCCA-
 A C G T A T C G G T C A A C T G A C T G A C G T A G C T A C G T A C G T G T A C A G T C C G T A A C T G
A C G T A C G T A C G T A C G T A C G T C G A T A C G T G A C T A C G T G T A C A G T C G C T A A C G T

RUNX2/MA0511.2/Jaspar

Match Rank:2
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-TSMGGTYTKCCAG
TTGCGGTTT-----
 A C G T A C G T A T C G G T C A A C T G A C T G A C G T A G C T A C G T A C G T G T A C A G T C C G T A A C T G
A G C T A C G T A C T G G A T C A C T G A C T G A C G T G A C T C G A T A C G T A C G T A C G T A C G T A C G T

RUNX3/MA0684.1/Jaspar

Match Rank:3
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--TSMGGTYTKCCAG
TTTGCGGTTT-----
 A C G T A C G T A C G T A T C G G T C A A C T G A C T G A C G T A G C T A C G T A C G T G T A C A G T C C G T A A C T G
C G A T A G C T A C G T T A C G A G T C A T C G A C T G A C G T A G C T C G A T A C G T A C G T A C G T A C G T A C G T

NFAT5/MA0606.1/Jaspar

Match Rank:4
Score:0.59
Offset:4
Orientation:forward strand
Alignment:TSMGGTYTKCCAG-
----ATTTTCCATT
 A C G T A T C G G T C A A C T G A C T G A C G T A G C T A C G T A C G T G T A C A G T C C G T A A C T G A C G T
A C G T A C G T A C G T A C G T C G T A C G A T A C G T A C G T G C A T A G T C A G T C G C T A G A C T C G A T

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:5
Score:0.59
Offset:6
Orientation:reverse strand
Alignment:TSMGGTYTKCCAG---
------ATGCCAGACN
 A C G T A T C G G T C A A C T G A C T G A C G T A G C T A C G T A C G T G T A C A G T C C G T A A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C G T A G C A T C A T G T A G C A G T C C G T A C T A G C G T A G A T C T A G C

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:6
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-TSMGGTYTKCCAG
CTGTGGTTTN----
 A C G T A C G T A T C G G T C A A C T G A C T G A C G T A G C T A C G T A C G T G T A C A G T C C G T A A C T G
G A T C A C G T A C T G A G C T A C T G A C T G A G C T A G C T C G A T A T C G A C G T A C G T A C G T A C G T

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:7
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--TSMGGTYTKCCAG
NNTGTGGTTT-----
 A C G T A C G T A C G T A T C G G T C A A C T G A C T G A C G T A G C T A C G T A C G T G T A C A G T C C G T A A C T G
A C G T G A C T C A G T A C T G G A C T A C T G A C T G A G C T A G C T C G A T A C G T A C G T A C G T A C G T A C G T

NFAT:AP1(RHD,bZIP)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:8
Score:0.58
Offset:-5
Orientation:reverse strand
Alignment:-----TSMGGTYTKCCAG--
NTGACTCANTTTTTCCANTN
 A C G T A C G T A C G T A C G T A C G T A C G T A T C G G T C A A C T G A C T G A C G T A G C T A C G T A C G T G T A C A G T C C G T A A C T G A C G T A C G T
T C G A G C A T A C T G C G T A A T G C G C A T G T A C C G T A A G C T G C A T A G C T A G C T G A C T A G C T A G T C A G T C G C T A A G C T G A C T A T G C

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:9
Score:0.58
Offset:6
Orientation:forward strand
Alignment:TSMGGTYTKCCAG-
------TTGCCAAG
 A C G T A T C G G T C A A C T G A C T G A C G T A G C T A C G T A C G T G T A C A G T C C G T A A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A G C T A C G T A C T G A T G C A G T C C G T A C T G A T A C G

MF0003.1_REL_class/Jaspar

Match Rank:10
Score:0.57
Offset:1
Orientation:forward strand
Alignment:TSMGGTYTKCCAG
-GGGGATTTCC--
 A C G T A T C G G T C A A C T G A C T G A C G T A G C T A C G T A C G T G T A C A G T C C G T A A C T G
A C G T A T C G A C T G C A T G C T A G G C T A C G A T A G C T G A C T G A T C G T A C A C G T A C G T