Information for 25-CAGGCTTGGTTCG (Motif 44)

A G T C C G T A A C T G A C T G A G T C A C G T A C G T A C T G A C T G A C G T A C G T A G T C A C T G
Reverse Opposite:
A G T C A C T G C G T A C G T A A G T C A G T C C G T A C G T A A C T G A G T C A G T C A C G T A C T G
p-value:1e-5
log p-value:-1.221e+01
Information Content per bp:1.530
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.41%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets33.3 +/- 18.2bp
Average Position of motif in Background74.2 +/- 9.6bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:1
Score:0.58
Offset:3
Orientation:forward strand
Alignment:CAGGCTTGGTTCG
---YCTTTGTTCC
 A G T C C G T A A C T G A C T G A G T C A C G T A C G T A C T G A C T G A C G T A C G T A G T C A C T G
A C G T A C G T A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A G T C A G T C

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:2
Score:0.57
Offset:1
Orientation:forward strand
Alignment:CAGGCTTGGTTCG
-AGGCCTNG----
 A G T C C G T A A C T G A C T G A G T C A C G T A C G T A C T G A C T G A C G T A C G T A G T C A C T G
A C G T C T G A A C T G A C T G A G T C A G T C A G C T C T A G T A C G A C G T A C G T A C G T A C G T

Nr2e3/MA0164.1/Jaspar

Match Rank:3
Score:0.56
Offset:0
Orientation:forward strand
Alignment:CAGGCTTGGTTCG
CAAGCTT------
 A G T C C G T A A C T G A C T G A G T C A C G T A C G T A C T G A C T G A C G T A C G T A G T C A C T G
G A T C C G T A C G T A A T C G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PAX5(Paired,Homeobox)/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer

Match Rank:4
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---CAGGCTTGGTTCG
NGTCACGCTTGGCTGC
 A C G T A C G T A C G T A G T C C G T A A C T G A C T G A G T C A C G T A C G T A C T G A C T G A C G T A C G T A G T C A C T G
C T A G A C T G A G C T A G T C G T C A G A T C T C A G A T G C G C A T G A C T A T C G T C A G T A G C G A C T C T A G T G A C

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:5
Score:0.53
Offset:1
Orientation:forward strand
Alignment:CAGGCTTGGTTCG
-AGGCCTAG----
 A G T C C G T A A C T G A C T G A G T C A C G T A C G T A C T G A C T G A C G T A C G T A G T C A C T G
A C G T T G C A A C T G T A C G A T G C A G T C G A C T T C G A A T C G A C G T A C G T A C G T A C G T

Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer

Match Rank:6
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--CAGGCTTGGTTCG
GTCATGCHTGRCTGS
 A C G T A C G T A G T C C G T A A C T G A C T G A G T C A C G T A C G T A C T G A C T G A C G T A C G T A G T C A C T G
A C T G A G C T A G T C G T C A A G C T T C A G A T G C G A T C G C A T A T C G T C G A T A G C C G A T C A T G T A G C

POL006.1_BREu/Jaspar

Match Rank:7
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:CAGGCTTGGTTCG
--GGCGCGCT---
 A G T C C G T A A C T G A C T G A G T C A C G T A C G T A C T G A C T G A C G T A C G T A G T C A C T G
A C G T A C G T C T A G T A C G A G T C A C T G A G T C A T C G A T G C A C G T A C G T A C G T A C G T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:8
Score:0.53
Offset:3
Orientation:forward strand
Alignment:CAGGCTTGGTTCG
---CCWTTGTYYB
 A G T C C G T A A C T G A C T G A G T C A C G T A C G T A C T G A C T G A C G T A C G T A G T C A C T G
A C G T A C G T A C G T A T G C A G T C G C A T A G C T A C G T T C A G C G A T A G C T G A T C A T C G

PB0180.1_Sp4_2/Jaspar

Match Rank:9
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--CAGGCTTGGTTCG
CAAAGGCGTGGCCAG
 A C G T A C G T A G T C C G T A A C T G A C T G A G T C A C G T A C G T A C T G A C T G A C G T A C G T A G T C A C T G
A G T C C G T A C G T A T C G A A T C G A C T G G T A C A C T G A C G T C T A G A C T G G A T C G A T C G T C A C A T G

Zfx/MA0146.2/Jaspar

Match Rank:10
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:CAGGCTTGGTTCG-
CAGGCCNNGGCCNN
 A G T C C G T A A C T G A C T G A G T C A C G T A C G T A C T G A C T G A C G T A C G T A G T C A C T G A C G T
A T G C C T G A C T A G A C T G T A G C A G T C A C G T T G A C C T A G T A C G G A T C A T G C T A G C T A G C