Information for 22-TGCMAGSTMWTTG (Motif 38)

A C G T A C T G A G T C G T A C C G T A A C T G A T G C A C G T G T A C G C T A A G C T A C G T A C T G
Reverse Opposite:
A G T C C G T A C T G A C G A T A C T G C G T A A T C G A G T C A C G T A C T G A C T G A G T C C G T A
p-value:1e-7
log p-value:-1.671e+01
Information Content per bp:1.873
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.68%
Number of Background Sequences with motif6.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets43.0 +/- 29.7bp
Average Position of motif in Background47.8 +/- 13.9bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0105.1_Meis3/Jaspar

Match Rank:1
Score:0.66
Offset:-4
Orientation:reverse strand
Alignment:----TGCMAGSTMWTTG
GTATTGACAGGTNNTT-
 A C G T A C G T A C G T A C G T A C G T A C T G A G T C G T A C C G T A A C T G A T G C A C G T G T A C G C T A A G C T A C G T A C T G
C A T G A C G T C G T A C G A T G A C T A C T G C G T A A G T C C T G A C T A G T A C G G A C T T G C A G C T A G A C T G C A T A C G T

PH0170.1_Tgif2/Jaspar

Match Rank:2
Score:0.65
Offset:-4
Orientation:reverse strand
Alignment:----TGCMAGSTMWTTG
GTATTGACAGCTNNTT-
 A C G T A C G T A C G T A C G T A C G T A C T G A G T C G T A C C G T A A C T G A T G C A C G T G T A C G C T A A G C T A C G T A C T G
A C T G A C G T C G T A C G A T C G A T A C T G C G T A A G T C C T G A C A T G T A G C G A C T T C G A T A C G G C A T C G A T A C G T

PH0102.1_Meis1/Jaspar

Match Rank:3
Score:0.65
Offset:-4
Orientation:reverse strand
Alignment:----TGCMAGSTMWTTG
NTATTGACAGCTNNTT-
 A C G T A C G T A C G T A C G T A C G T A C T G A G T C G T A C C G T A A C T G A T G C A C G T G T A C G C T A A G C T A C G T A C T G
C T A G A C G T C G T A C G A T A C G T A C T G C G T A A G T C C T G A A C T G A T G C G A C T T A G C A T C G G C A T G C A T A C G T

PH0104.1_Meis2/Jaspar

Match Rank:4
Score:0.64
Offset:-4
Orientation:reverse strand
Alignment:----TGCMAGSTMWTTG
NTATTGACAGGTNNTN-
 A C G T A C G T A C G T A C G T A C G T A C T G A G T C G T A C C G T A A C T G A T G C A C G T G T A C G C T A A G C T A C G T A C T G
C T A G C A G T G C T A C G A T G A C T C T A G C G T A A G T C C T G A A C T G A T C G G A C T T A G C A G C T G C A T C G A T A C G T

PH0140.1_Pknox1/Jaspar

Match Rank:5
Score:0.64
Offset:-4
Orientation:reverse strand
Alignment:----TGCMAGSTMWTTG
GGATTGACAGGTCNTT-
 A C G T A C G T A C G T A C G T A C G T A C T G A G T C G T A C C G T A A C T G A T G C A C G T G T A C G C T A A G C T A C G T A C T G
A C T G A C T G C G T A C G A T A C G T C T A G C G T A A G T C C T G A A C T G A T C G G A C T T A G C A C G T G A C T G C A T A C G T

PH0141.1_Pknox2/Jaspar

Match Rank:6
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----TGCMAGSTMWTTG
NNATTGACAGGTGCTT-
 A C G T A C G T A C G T A C G T A C G T A C T G A G T C G T A C C G T A A C T G A T G C A C G T G T A C G C T A A G C T A C G T A C T G
T C G A C A G T C G T A C A G T A G C T C T A G C G T A A G T C C T G A C A T G A T C G A G C T T A C G A G T C G A C T C G A T A C G T

Esrra/MA0592.2/Jaspar

Match Rank:7
Score:0.62
Offset:0
Orientation:forward strand
Alignment:TGCMAGSTMWTTG
TTCAAGGTCAT--
 A C G T A C T G A G T C G T A C C G T A A C T G A T G C A C G T G T A C G C T A A G C T A C G T A C T G
A C G T G A C T T A G C C T G A C T G A A C T G A C T G A C G T A T G C T C G A G C A T A C G T A C G T

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:8
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-TGCMAGSTMWTTG
TTGCCAAG------
 A C G T A C G T A C T G A G T C G T A C C G T A A C T G A T G C A C G T G T A C G C T A A G C T A C G T A C T G
A G C T A C G T A C T G A T G C A G T C C G T A C T G A T A C G A C G T A C G T A C G T A C G T A C G T A C G T

EN2/MA0642.1/Jaspar

Match Rank:9
Score:0.59
Offset:5
Orientation:reverse strand
Alignment:TGCMAGSTMWTTG--
-----GNTAATTGGN
 A C G T A C T G A G T C G T A C C G T A A C T G A T G C A C G T G T A C G C T A A G C T A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T A C G A T G C A G C T T C G A C G T A A C G T A C G T T C A G T A C G A T C G

PH0169.1_Tgif1/Jaspar

Match Rank:10
Score:0.58
Offset:-5
Orientation:forward strand
Alignment:-----TGCMAGSTMWTTG
GATATTGACAGCTGCGT-
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C G T A C C G T A A C T G A T G C A C G T G T A C G C T A A G C T A C G T A C T G
C A G T C T G A A C G T C G T A C G A T C G A T A C T G C G T A A G T C C T G A C T A G A T G C A C G T T A C G T A G C A C T G C G A T A C G T