Information for 20-TGBTAAGTAATAG (Motif 33)

A C G T T C A G A G C T A G C T C G T A C G T A A C T G C G A T C T G A G C T A A G C T C T G A A C T G
Reverse Opposite:
G T A C G A C T C T G A C A G T A G C T G C T A T A G C A C G T A C G T C T G A T C G A A G T C C G T A
p-value:1e-8
log p-value:-1.952e+01
Information Content per bp:1.731
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.36%
Number of Background Sequences with motif44.1
Percentage of Background Sequences with motif0.09%
Average Position of motif in Targets51.4 +/- 25.5bp
Average Position of motif in Background44.7 +/- 27.1bp
Strand Bias (log2 ratio + to - strand density)1.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0063.1_Hoxb8/Jaspar

Match Rank:1
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--TGBTAAGTAATAG-
ACCGGCAATTAATAAA
 A C G T A C G T A C G T T C A G A G C T A G C T C G T A C G T A A C T G C G A T C T G A G C T A A G C T C T G A A C T G A C G T
G C T A T A G C A G T C C A T G C T A G G A T C G T C A C G T A C G A T G C A T C G T A G C T A G A C T G T C A C T G A C G T A

PH0055.1_Hoxa7_2/Jaspar

Match Rank:2
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-TGBTAAGTAATAG--
GTAGTAATTAATGGAA
 A C G T A C G T T C A G A G C T A G C T C G T A C G T A A C T G C G A T C T G A G C T A A G C T C T G A A C T G A C G T A C G T
A C T G A C G T T G C A A C T G G C A T G T C A C G T A A C G T C A G T C G T A T G C A A C G T T C A G A T C G G T C A T G C A

Hoxd8/MA0910.1/Jaspar

Match Rank:3
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-TGBTAAGTAATAG---
TAAATAATTAATGGCTA
 A C G T A C G T T C A G A G C T A G C T C G T A C G T A A C T G C G A T C T G A G C T A A G C T C T G A A C T G A C G T A C G T A C G T
C A G T G C T A C T G A C G A T G A C T G C T A C G T A C G A T G C A T C G T A G C T A G A C T C T A G C T A G G A T C C G A T G C T A

PH0080.1_Hoxd8/Jaspar

Match Rank:4
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-TGBTAAGTAATAG---
TAAATAATTAATGGCTA
 A C G T A C G T T C A G A G C T A G C T C G T A C G T A A C T G C G A T C T G A G C T A A G C T C T G A A C T G A C G T A C G T A C G T
C A G T G C T A C T G A C G A T G A C T G C T A C G T A C G A T G C A T C G T A G C T A G A C T C T A G C T A G G A T C C G A T G C T A

PH0135.1_Phox2a/Jaspar

Match Rank:5
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-TGBTAAGTAATAG--
NNACTAATTAATNNNN
 A C G T A C G T T C A G A G C T A G C T C G T A C G T A A C T G C G A T C T G A G C T A A G C T C T G A A C T G A C G T A C G T
A T G C A G C T T C G A G A T C A G C T G T C A C G T A A G C T A C G T C T G A C T G A A G C T C A T G T G A C A G C T T C A G

PH0030.1_Esx1/Jaspar

Match Rank:6
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---TGBTAAGTAATAG-
ATCCATTAATTAATTGA
 A C G T A C G T A C G T A C G T T C A G A G C T A G C T C G T A C G T A A C T G C G A T C T G A G C T A A G C T C T G A A C T G A C G T
G C T A G C A T A G T C A T G C C T G A G A C T G A C T C G T A C T G A A G C T G A C T C T G A C T G A A G C T C A G T A T C G G C T A

TEF/MA0843.1/Jaspar

Match Rank:7
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:TGBTAAGTAATAG
NGTTACGTAATN-
 A C G T T C A G A G C T A G C T C G T A C G T A A C T G C G A T C T G A G C T A A G C T C T G A A C T G
A C G T T C A G G A C T C G A T T C G A A G T C C T A G A G C T G C T A C G T A A G C T T C G A A C G T

PH0128.1_Otp/Jaspar

Match Rank:8
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--TGBTAAGTAATAG--
CNNATTAATTAATTNNN
 A C G T A C G T A C G T T C A G A G C T A G C T C G T A C G T A A C T G C G A T C T G A G C T A A G C T C T G A A C T G A C G T A C G T
G T A C G T A C G T C A T C G A G A C T G A C T T C G A C T G A A G C T A C G T C T G A C T G A A G C T C G A T C T G A A G T C A C T G

PH0091.1_Lhx1/Jaspar

Match Rank:9
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---TGBTAAGTAATAG-
NNTTATTAATTAATNCN
 A C G T A C G T A C G T A C G T T C A G A G C T A G C T C G T A C G T A A C T G C G A T C T G A G C T A A G C T C T G A A C T G A C G T
T G A C C T G A C G A T C G A T C G T A G A C T G A C T T C G A C G T A C G A T A C G T C T G A C T G A G A C T G C A T A G T C A C T G

PH0106.1_Msx1/Jaspar

Match Rank:10
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-TGBTAAGTAATAG--
NNATTAATTAGTNGNN
 A C G T A C G T T C A G A G C T A G C T C G T A C G T A A C T G C G A T C T G A G C T A A G C T C T G A A C T G A C G T A C G T
C A T G C G T A T G C A G A C T G A C T C G T A C G T A A C G T A C G T C T G A C T A G G A C T C G A T C A T G A G T C T G C A