Information for 17-CGGGAGCTGCCAGKAC (Motif 29)

G T A C C T A G A T C G C A T G C T G A A C T G G T A C A C G T T A C G A G T C A T G C C T G A A C T G A C G T C G T A A T G C
Reverse Opposite:
A T C G A C G T G T C A A G T C G A C T A T C G T A C G A G T C G T C A A C T G G T A C A G C T G A T C A T G C A G T C C A T G
p-value:1e-9
log p-value:-2.115e+01
Information Content per bp:1.673
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.63%
Number of Background Sequences with motif63.9
Percentage of Background Sequences with motif0.14%
Average Position of motif in Targets55.0 +/- 27.9bp
Average Position of motif in Background49.6 +/- 26.4bp
Strand Bias (log2 ratio + to - strand density)0.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFIX/MA0671.1/Jaspar

Match Rank:1
Score:0.54
Offset:5
Orientation:forward strand
Alignment:CGGGAGCTGCCAGKAC
-----CGTGCCAAG--
 G T A C C T A G A T C G C A T G C T G A A C T G G T A C A C G T T A C G A G T C A T G C C T G A A C T G A C G T C G T A A T G C
A C G T A C G T A C G T A C G T A C G T T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T A C G T

Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer

Match Rank:2
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:CGGGAGCTGCCAGKAC
----ARNTGACA----
 G T A C C T A G A T C G C A T G C T G A A C T G G T A C A C G T T A C G A G T C A T G C C T G A A C T G A C G T C G T A A T G C
A C G T A C G T A C G T A C G T T G C A C T A G G A T C A C G T C T A G C G T A G T A C T C G A A C G T A C G T A C G T A C G T

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:3
Score:0.54
Offset:6
Orientation:reverse strand
Alignment:CGGGAGCTGCCAGKAC
------ATGCCAGACN
 G T A C C T A G A T C G C A T G C T G A A C T G G T A C A C G T T A C G A G T C A T G C C T G A A C T G A C G T C G T A A T G C
A C G T A C G T A C G T A C G T A C G T A C G T C G T A G C A T C A T G T A G C A G T C C G T A C T A G C G T A G A T C T A G C

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:4
Score:0.54
Offset:6
Orientation:forward strand
Alignment:CGGGAGCTGCCAGKAC
------TTGCCAAG--
 G T A C C T A G A T C G C A T G C T G A A C T G G T A C A C G T T A C G A G T C A T G C C T G A A C T G A C G T C G T A A T G C
A C G T A C G T A C G T A C G T A C G T A C G T A G C T A C G T A C T G A T G C A G T C C G T A C T G A T A C G A C G T A C G T

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:5
Score:0.54
Offset:4
Orientation:forward strand
Alignment:CGGGAGCTGCCAGKAC
----AGGTGTCA----
 G T A C C T A G A T C G C A T G C T G A A C T G G T A C A C G T T A C G A G T C A T G C C T G A A C T G A C G T C G T A A T G C
A C G T A C G T A C G T A C G T C T G A C T A G A T C G A G C T A C T G G A C T A G T C C T G A A C G T A C G T A C G T A C G T

NFIC/MA0161.1/Jaspar

Match Rank:6
Score:0.53
Offset:7
Orientation:reverse strand
Alignment:CGGGAGCTGCCAGKAC
-------TGCCAA---
 G T A C C T A G A T C G C A T G C T G A A C T G G T A C A C G T T A C G A G T C A T G C C T G A A C T G A C G T C G T A A T G C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C A T C A T G G A T C A G T C G T C A C T G A A C G T A C G T A C G T

PH0170.1_Tgif2/Jaspar

Match Rank:7
Score:0.52
Offset:0
Orientation:forward strand
Alignment:CGGGAGCTGCCAGKAC
AACTAGCTGTCAATAC
 G T A C C T A G A T C G C A T G C T G A A C T G G T A C A C G T T A C G A G T C A T G C C T G A A C T G A C G T C G T A A T G C
G C T A C G T A A T G C A G C T C T G A A T C G G T A C A G C T C T A G C G A T A G T C C G T A G C T A C G A T T G C A T A G C

Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer

Match Rank:8
Score:0.52
Offset:2
Orientation:forward strand
Alignment:CGGGAGCTGCCAGKAC
--GGTGYTGACAGS--
 G T A C C T A G A T C G C A T G C T G A A C T G G T A C A C G T T A C G A G T C A T G C C T G A A C T G A C G T C G T A A T G C
A C G T A C G T T C A G A T C G G A C T A C T G G A C T C A G T C T A G C G T A G T A C C G T A C T A G A T C G A C G T A C G T

THAP1/MA0597.1/Jaspar

Match Rank:9
Score:0.52
Offset:6
Orientation:forward strand
Alignment:CGGGAGCTGCCAGKAC
------CTGCCCGCA-
 G T A C C T A G A T C G C A T G C T G A A C T G G T A C A C G T T A C G A G T C A T G C C T G A A C T G A C G T C G T A A T G C
A C G T A C G T A C G T A C G T A C G T A C G T A G T C G A C T C A T G G A T C G T A C G T A C C A T G A G T C G T C A A C G T

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:10
Score:0.52
Offset:5
Orientation:reverse strand
Alignment:CGGGAGCTGCCAGKAC
-----VBTGWCAGCB-
 G T A C C T A G A T C G C A T G C T G A A C T G G T A C A C G T T A C G A G T C A T G C C T G A A C T G A C G T C G T A A T G C
A C G T A C G T A C G T A C G T A C G T T C A G A T G C A C G T A C T G C G T A A G T C C G T A A T C G A T G C A G T C A C G T