Information for 7-KGTTKWTYKSCCASMR (Motif 12)

A C T G A T C G A C G T A C G T A C G T C G T A A C G T A G C T C A T G A T G C A G T C A T G C C G T A A T G C G T A C C T G A
Reverse Opposite:
A G C T A C T G A T C G C G A T A T C G A C T G A T C G G T A C C T G A C G T A G C A T G T C A C G T A C G T A A T G C G T A C
p-value:1e-11
log p-value:-2.737e+01
Information Content per bp:1.760
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.22%
Number of Background Sequences with motif13.1
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets53.7 +/- 23.6bp
Average Position of motif in Background44.8 +/- 33.8bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MF0005.1_Forkhead_class/Jaspar

Match Rank:1
Score:0.56
Offset:0
Orientation:forward strand
Alignment:KGTTKWTYKSCCASMR
TGTTTATTT-------
 A C T G A T C G A C G T A C G T A C G T C G T A A C G T A G C T C A T G A T G C A G T C A T G C C G T A A T G C G T A C C T G A
G C A T C T A G A G C T G A C T C A G T C T G A A G C T C A G T A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Foxd3/MA0041.1/Jaspar

Match Rank:2
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---KGTTKWTYKSCCASMR
GAATGTTTGTTT-------
 A C G T A C G T A C G T A C T G A T C G A C G T A C G T A C G T C G T A A C G T A G C T C A T G A T G C A G T C A T G C C G T A A T G C G T A C C T G A
C T A G G C T A G C T A G A C T C T A G A C G T C G A T C A G T C T A G G A C T A C G T A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Foxq1/MA0040.1/Jaspar

Match Rank:3
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---KGTTKWTYKSCCASMR
TATTGTTTATT--------
 A C G T A C G T A C G T A C T G A T C G A C G T A C G T A C G T C G T A A C G T A G C T C A T G A T G C A G T C A T G C C G T A A T G C G T A C C T G A
G A C T C T G A G C A T C G A T A C T G A C G T A C G T A C G T C T G A A C G T C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Foxj2/MA0614.1/Jaspar

Match Rank:4
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-KGTTKWTYKSCCASMR
TTGTTTAC---------
 A C G T A C T G A T C G A C G T A C G T A C G T C G T A A C G T A G C T C A T G A T G C A G T C A T G C C G T A A T G C G T A C C T G A
C G A T A C G T C T A G A C G T C G A T A C G T C G T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:5
Score:0.54
Offset:5
Orientation:forward strand
Alignment:KGTTKWTYKSCCASMR
-----HTTTCCCASG-
 A C T G A T C G A C G T A C G T A C G T C G T A A C G T A G C T C A T G A T G C A G T C A T G C C G T A A T G C G T A C C T G A
A C G T A C G T A C G T A C G T A C G T G A C T C A G T A G C T C G A T A G T C G A T C A G T C C G T A A T G C T C A G A C G T

HOXA13/MA0650.1/Jaspar

Match Rank:6
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:KGTTKWTYKSCCASMR
TTTTTATTGG------
 A C T G A T C G A C G T A C G T A C G T C G T A A C G T A G C T C A T G A T G C A G T C A T G C C G T A A T G C G T A C C T G A
C A G T A C G T A C G T C G A T C G A T C G T A C G A T C A G T T C A G A T C G A C G T A C G T A C G T A C G T A C G T A C G T

HOXB13/MA0901.1/Jaspar

Match Rank:7
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:KGTTKWTYKSCCASMR
NTTTTATTGG------
 A C T G A T C G A C G T A C G T A C G T C G T A A C G T A G C T C A T G A T G C A G T C A T G C C G T A A T G C G T A C C T G A
C A T G C A G T C A G T C G A T G C A T C T G A G C A T C A G T C T A G A T C G A C G T A C G T A C G T A C G T A C G T A C G T

PB0093.1_Zfp105_1/Jaspar

Match Rank:8
Score:0.53
Offset:-4
Orientation:reverse strand
Alignment:----KGTTKWTYKSCCASMR
NTNTTGTTGTTTGTN-----
 A C G T A C G T A C G T A C G T A C T G A T C G A C G T A C G T A C G T C G T A A C G T A G C T C A T G A T G C A G T C A T G C C G T A A T G C G T A C C T G A
G A T C C G A T G T A C C G A T G A C T C A T G G C A T A G C T C T A G C G A T C G A T C A G T C T A G G A C T C G A T A C G T A C G T A C G T A C G T A C G T

POL007.1_BREd/Jaspar

Match Rank:9
Score:0.53
Offset:1
Orientation:forward strand
Alignment:KGTTKWTYKSCCASMR
-GTTTGTT--------
 A C T G A T C G A C G T A C G T A C G T C G T A A C G T A G C T C A T G A T G C A G T C A T G C C G T A A T G C G T A C C T G A
A C G T C T A G A C G T C A G T A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer

Match Rank:10
Score:0.53
Offset:5
Orientation:forward strand
Alignment:KGTTKWTYKSCCASMR----
-----ATTTCCCAGVAKSCY
 A C T G A T C G A C G T A C G T A C G T C G T A A C G T A G C T C A T G A T G C A G T C A T G C C G T A A T G C G T A C C T G A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T G C A G C A T A G C T G C A T A G T C A G T C A G T C C T G A A C T G T C G A T C G A C A G T A T C G A G T C G A T C