Information for 12-GGCTCAGGTTACA (Motif 17)

A C T G A T C G A G T C A C G T A G T C C G T A A C T G C T A G A G C T A C G T C G T A A G T C C G T A
Reverse Opposite:
A C G T A C T G C G A T C G T A C T G A A G T C A G T C A C G T T A C G C G T A A C T G A T G C A G T C
p-value:1e-9
log p-value:-2.144e+01
Information Content per bp:1.935
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.59%
Number of Background Sequences with motif2.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets46.0 +/- 27.0bp
Average Position of motif in Background35.6 +/- 21.1bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer

Match Rank:1
Score:0.80
Offset:0
Orientation:forward strand
Alignment:GGCTCAGGTTACA
GKVTCADRTTWC-
 A C T G A T C G A G T C A C G T A G T C C G T A A C T G C T A G A G C T A C G T C G T A A G T C C G T A
C T A G C A T G T G C A A C G T A G T C C G T A C A T G T C A G A C G T A C G T G C T A A G T C A C G T

Six2(Homeobox)/NephronProgenitor-Six2-ChIP-Seq(GSE39837)/Homer

Match Rank:2
Score:0.76
Offset:0
Orientation:reverse strand
Alignment:GGCTCAGGTTACA
GKMTCADRTTWC-
 A C T G A T C G A G T C A C G T A G T C C G T A A C T G C T A G A G C T A C G T C G T A A G T C C G T A
C T A G C A G T T G C A A C G T G A T C T C G A C T A G T C A G A C G T C A G T G C A T G A T C A C G T

Gfi1b/MA0483.1/Jaspar

Match Rank:3
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:GGCTCAGGTTACA
TGCTGTGATTT--
 A C T G A T C G A G T C A C G T A G T C C G T A A C T G C T A G A G C T A C G T C G T A A G T C C G T A
C G A T C T A G G A T C G C A T A T C G C G A T A C T G T C G A A G C T A C G T A C G T A C G T A C G T

RHOXF1/MA0719.1/Jaspar

Match Rank:4
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-GGCTCAGGTTACA
NGGATTAN------
 A C G T A C T G A T C G A G T C A C G T A G T C C G T A A C T G C T A G A G C T A C G T C G T A A G T C C G T A
C A T G C T A G A C T G G T C A A C G T G A C T G C T A C G A T A C G T A C G T A C G T A C G T A C G T A C G T

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:5
Score:0.54
Offset:5
Orientation:reverse strand
Alignment:GGCTCAGGTTACA--
-----TGGTTTCAGT
 A C T G A T C G A G T C A C G T A G T C C G T A A C T G C T A G A G C T A C G T C G T A A G T C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G A C T C T A G T A C G C G A T G C A T A C G T T A G C T C G A A T C G C G A T

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:6
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:GGCTCAGGTTACA
-GCAGTGATTT--
 A C T G A T C G A G T C A C G T A G T C C G T A A C T G C T A G A G C T A C G T C G T A A G T C C G T A
A C G T C T A G A G T C G C T A A T C G C G A T A C T G T C G A A C G T A C G T A C G T A C G T A C G T

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:7
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-GGCTCAGGTTACA
TGCCTGAGGCN---
 A C G T A C T G A T C G A G T C A C G T A G T C C G T A A C T G C T A G A G C T A C G T C G T A A G T C C G T A
G C A T A T C G A T G C A G T C A C G T A T C G T C G A T C A G A T C G A T G C C A G T A C G T A C G T A C G T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:8
Score:0.52
Offset:1
Orientation:forward strand
Alignment:GGCTCAGGTTACA
-GCTGTGGTTT--
 A C T G A T C G A G T C A C G T A G T C C G T A A C T G C T A G A G C T A C G T C G T A A G T C C G T A
A C G T A C T G G A T C G A C T A C T G A C G T C A T G A C T G A C G T A G C T C G A T A C G T A C G T

TFAP2C(var.2)/MA0814.1/Jaspar

Match Rank:9
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-GGCTCAGGTTACA
NGCCTNAGGCN---
 A C G T A C T G A T C G A G T C A C G T A G T C C G T A A C T G C T A G A G C T A C G T C G T A A G T C C G T A
G C A T A T C G A T G C A G T C A G C T A T C G T C G A T C A G A T C G A T G C C A G T A C G T A C G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:10
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:GGCTCAGGTTACA
NGCTN--------
 A C T G A T C G A G T C A C G T A G T C C G T A A C T G C T A G A G C T A C G T C G T A A G T C C G T A
T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T