Information for 11-CGGCTCGAGGCGG (Motif 16)

A G T C A C T G A C T G A G T C A C G T A T G C A T C G C G T A A C T G A C T G G T A C A C T G A C T G
Reverse Opposite:
A G T C A G T C A C T G A G T C A G T C A C G T A T G C A T C G C G T A A C T G A G T C A G T C A C T G
p-value:1e-9
log p-value:-2.144e+01
Information Content per bp:1.924
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.59%
Number of Background Sequences with motif3.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets47.0 +/- 24.6bp
Average Position of motif in Background58.0 +/- 23.1bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SP2/MA0516.1/Jaspar

Match Rank:1
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:CGGCTCGAGGCGG---
-GGGNGGGGGCGGGGC
 A G T C A C T G A C T G A G T C A C G T A T G C A T C G C G T A A C T G A C T G G T A C A C T G A C T G A C G T A C G T A C G T
A C G T T A C G T A C G T A C G T C G A C T A G C T A G C T A G C T A G A C T G G T A C C T A G A T C G C T A G T C A G T A G C

TFAP2A/MA0003.3/Jaspar

Match Rank:2
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:CGGCTCGAGGCGG
-NGCCTGAGGCN-
 A G T C A C T G A C T G A G T C A C G T A T G C A T C G C G T A A C T G A C T G G T A C A C T G A C T G
A C G T G C A T A T C G A T G C A G T C A C G T A T C G T C G A T C A G A T C G A T G C C A T G A C G T

ZSCAN22(Zf)/HEK293-ZSCAN22.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:3
Score:0.55
Offset:-6
Orientation:forward strand
Alignment:------CGGCTCGAGGCGG-
SMCAGTCWGAKGGAGGAGGC
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C T G A C T G A G T C A C G T A T G C A T C G C G T A A C T G A C T G G T A C A C T G A C T G A C G T
A T C G T G A C A T G C C T G A T C A G G A C T A G T C C G A T T C A G T C G A C A T G C T A G C T A G C G T A C T A G C T A G C T G A C T A G C T A G A T G C

TFAP2A(var.2)/MA0810.1/Jaspar

Match Rank:4
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:CGGCTCGAGGCGG
TGCCCNGGGGCA-
 A G T C A C T G A C T G A G T C A C G T A T G C A T C G C G T A A C T G A C T G G T A C A C T G A C T G
G A C T T A C G T A G C A G T C A G T C A C T G T C A G T C A G T C A G A T C G A T G C C T G A A C G T

ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:5
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:CGGCTCGAGGCGG
-GGCTCYAKCAYC
 A G T C A C T G A C T G A G T C A C G T A T G C A T C G C G T A A C T G A C T G G T A C A C T G A C T G
A C G T C A T G A C T G A G T C A C G T A G T C G A T C C G T A A C T G T A G C C T G A A G C T T A G C

TFAP2C(var.2)/MA0814.1/Jaspar

Match Rank:6
Score:0.55
Offset:1
Orientation:forward strand
Alignment:CGGCTCGAGGCGG
-AGCCTCAGGCA-
 A G T C A C T G A C T G A G T C A C G T A T G C A T C G C G T A A C T G A C T G G T A C A C T G A C T G
A C G T G T C A T A C G A T G C A G T C A G C T T A G C T C G A T C A G A T C G T A G C C G T A A C G T

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:7
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:CGGCTCGAGGCGG--------
-GCCASCAGGGGGCGCYVNNG
 A G T C A C T G A C T G A G T C A C G T A T G C A T C G C G T A A C T G A C T G G T A C A C T G A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C T A G T A G C A G T C C G T A T A G C G A T C C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T A G A T G C G A T C T C A G A C T G T C A G A T C G

POL010.1_DCE_S_III/Jaspar

Match Rank:8
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:CGGCTCGAGGCGG
-NGCTN-------
 A G T C A C T G A C T G A G T C A C G T A T G C A T C G C G T A A C T G A C T G G T A C A C T G A C T G
A C G T T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:9
Score:0.54
Offset:1
Orientation:forward strand
Alignment:CGGCTCGAGGCGG
-AGCCTCAGGCA-
 A G T C A C T G A C T G A G T C A C G T A T G C A T C G C G T A A C T G A C T G G T A C A C T G A C T G
A C G T G T C A T A C G A T G C A G T C A G C T T A G C T G C A T C A G T A C G T A G C C G T A A C G T

SP1/MA0079.3/Jaspar

Match Rank:10
Score:0.54
Offset:5
Orientation:reverse strand
Alignment:CGGCTCGAGGCGG---
-----GGGGGCGGGGC
 A G T C A C T G A C T G A G T C A C G T A T G C A T C G C G T A A C T G A C T G G T A C A C T G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C A G C T A G C T A G A C T G A C T G G T A C C T A G A C T G C T A G T C A G T G A C