Information for 8-YRACCGAGAT (Motif 14)

A G T C C T G A C G T A A G T C A G T C A C T G C G T A A C T G G T C A A C G T
Reverse Opposite:
C G T A A C G T A G T C A C G T A G T C A C T G A C T G A C G T A G C T C T A G
p-value:1e-9
log p-value:-2.223e+01
Information Content per bp:1.906
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.83%
Number of Background Sequences with motif8.0
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets60.1 +/- 20.2bp
Average Position of motif in Background57.4 +/- 28.6bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0138.1_Irf4_2/Jaspar

Match Rank:1
Score:0.79
Offset:-1
Orientation:reverse strand
Alignment:-YRACCGAGAT----
GNNACCGAGAATNNN
 A C G T A G T C C T G A C G T A A G T C A G T C A C T G C G T A A C T G G T C A A C G T A C G T A C G T A C G T A C G T
A T C G G T A C C T G A G C T A A G T C A G T C C A T G T C G A C A T G G C T A C T G A C G A T T C G A A T G C A G C T

PB0140.1_Irf6_2/Jaspar

Match Rank:2
Score:0.79
Offset:-1
Orientation:reverse strand
Alignment:-YRACCGAGAT----
NNNACCGAGAGTNNN
 A C G T A G T C C T G A C G T A A G T C A G T C A C T G C G T A A C T G G T C A A C G T A C G T A C G T A C G T A C G T
A T C G G A C T C A T G G T C A A G T C G A T C C T A G T C G A T A C G G T C A C A T G C G A T T C A G T A C G A C G T

PB0139.1_Irf5_2/Jaspar

Match Rank:3
Score:0.75
Offset:-1
Orientation:forward strand
Alignment:-YRACCGAGAT----
TTGACCGAGAATTCC
 A C G T A G T C C T G A C G T A A G T C A G T C A C T G C G T A A C T G G T C A A C G T A C G T A C G T A C G T A C G T
A G C T G C A T C T A G C G T A G A C T G T A C C T A G C T G A A T C G C G T A C T G A G A C T G A C T A G T C T A G C

RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer

Match Rank:4
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:YRACCGAGAT
TGACCTARTT
 A G T C C T G A C G T A A G T C A G T C A C T G C G T A A C T G G T C A A C G T
A G C T C T A G T C G A A G T C A T G C A G C T T G C A T C A G G C A T C G A T

RORA(var.2)/MA0072.1/Jaspar

Match Rank:5
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-YRACCGAGAT---
TTGACCTANTTATN
 A C G T A G T C C T G A C G T A A G T C A G T C A C T G C G T A A C T G G T C A A C G T A C G T A C G T A C G T
A G C T A C G T A C T G C G T A A G T C A G T C A G C T C G T A T A G C C G A T A C G T G C T A G C A T C G T A

MF0009.1_TRP(MYB)_class/Jaspar

Match Rank:6
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:YRACCGAGAT
-AACCGANA-
 A G T C C T G A C G T A A G T C A G T C A C T G C G T A A C T G G T C A A C G T
A C G T C G T A C G T A T A G C A G T C C T A G G C T A G T A C G C T A A C G T

PB0126.1_Gata5_2/Jaspar

Match Rank:7
Score:0.60
Offset:1
Orientation:forward strand
Alignment:YRACCGAGAT--------
-GACAGAGATATCAGTGT
 A G T C C T G A C G T A A G T C A G T C A C T G C G T A A C T G G T C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T T C A G T G C A A G T C G T C A C T A G G T C A C A T G T C G A C A G T G T C A C A G T G A T C C G T A C T A G G A C T A C G T A C G T

RORA/MA0071.1/Jaspar

Match Rank:8
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:YRACCGAGAT
TGACCTTGAT
 A G T C C T G A C G T A A G T C A G T C A C T G C G T A A C T G G T C A A C G T
A C G T A C T G C G T A A G T C A G T C A G C T G C A T A C T G C G T A G C A T

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:9
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:YRACCGAGAT--
--GCAGTGATTT
 A G T C C T G A C G T A A G T C A G T C A C T G C G T A A C T G G T C A A C G T A C G T A C G T
A C G T A C G T C T A G A G T C G C T A A T C G C G A T A C T G T C G A A C G T A C G T A C G T

PB0035.1_Irf5_1/Jaspar

Match Rank:10
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--YRACCGAGAT---
ATAAACCGAAACCAA
 A C G T A C G T A G T C C T G A C G T A A G T C A G T C A C T G C G T A A C T G G T C A A C G T A C G T A C G T A C G T
C G T A C G A T C T G A C G T A C T G A G A T C G A T C C T A G C T G A C G T A C G T A T A G C G A T C C T G A T C G A