Information for 5-SYCWGGGRHMDTYCTS (Motif 13)

A T G C G A C T A G T C C G A T C T A G A C T G C T A G T C G A G T A C G T A C C G A T C G A T A G C T A G T C G A C T A T C G
Reverse Opposite:
A T G C C T G A T C A G C T G A C G T A G C T A C A T G C A T G A G C T G A T C G T A C A G T C C G T A C T A G C T G A T A C G
p-value:1e-9
log p-value:-2.265e+01
Information Content per bp:1.578
Number of Target Sequences with motif25.0
Percentage of Target Sequences with motif2.96%
Number of Background Sequences with motif279.6
Percentage of Background Sequences with motif0.60%
Average Position of motif in Targets49.8 +/- 24.0bp
Average Position of motif in Background49.0 +/- 25.5bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.12
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer

Match Rank:1
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--SYCWGGGRHMDTYCTS
TCCCCTGGGGAC------
 A C G T A C G T A T G C G A C T A G T C C G A T C T A G A C T G C T A G T C G A G T A C G T A C C G A T C G A T A G C T A G T C G A C T A T C G
A G C T A G T C A G T C G A T C G A T C C G A T C T A G C T A G C T A G T C A G T G C A G T A C A C G T A C G T A C G T A C G T A C G T A C G T

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:2
Score:0.65
Offset:3
Orientation:forward strand
Alignment:SYCWGGGRHMDTYCTS
---NGGGGATTTCCC-
 A T G C G A C T A G T C C G A T C T A G A C T G C T A G T C G A G T A C G T A C C G A T C G A T A G C T A G T C G A C T A T C G
A C G T A C G T A C G T C G T A C A T G C A T G A C T G C T A G T C G A G C A T C G A T A G C T A G T C G A T C G T A C A C G T

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:3
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-SYCWGGGRHMDTYCTS
WDNCTGGGCA-------
 A C G T A T G C G A C T A G T C C G A T C T A G A C T G C T A G T C G A G T A C G T A C C G A T C G A T A G C T A G T C G A C T A T C G
G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

MF0003.1_REL_class/Jaspar

Match Rank:4
Score:0.61
Offset:4
Orientation:forward strand
Alignment:SYCWGGGRHMDTYCTS
----GGGGATTTCC--
 A T G C G A C T A G T C C G A T C T A G A C T G C T A G T C G A G T A C G T A C C G A T C G A T A G C T A G T C G A C T A T C G
A C G T A C G T A C G T A C G T A T C G A C T G C A T G C T A G G C T A C G A T A G C T G A C T G A T C G T A C A C G T A C G T

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:5
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:SYCWGGGRHMDTYCTS
----GGGAATTTCC--
 A T G C G A C T A G T C C G A T C T A G A C T G C T A G T C G A G T A C G T A C C G A T C G A T A G C T A G T C G A C T A T C G
A C G T A C G T A C G T A C G T A C T G C T A G A C T G C T G A T C G A C G A T A G C T C G A T G T A C G T A C A C G T A C G T

REL/MA0101.1/Jaspar

Match Rank:6
Score:0.60
Offset:4
Orientation:forward strand
Alignment:SYCWGGGRHMDTYCTS
----GGGGATTTCC--
 A T G C G A C T A G T C C G A T C T A G A C T G C T A G T C G A G T A C G T A C C G A T C G A T A G C T A G T C G A C T A T C G
A C G T A C G T A C G T A C G T A T C G A C T G C A T G C T A G G T C A C G A T C G A T C G A T A G T C G T A C A C G T A C G T

Hand2(bHLH)/Mesoderm-Hand2-ChIP-Seq(GSE61475)/Homer

Match Rank:7
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:SYCWGGGRHMDTYCTS
GYCTGGYYTNTGTCA-
 A T G C G A C T A G T C C G A T C T A G A C T G C T A G T C G A G T A C G T A C C G A T C G A T A G C T A G T C G A C T A T C G
A T C G A G C T A G T C A C G T A C T G A T C G A G C T G A C T G C A T A G C T G A C T T A C G A G C T G A T C G C T A A C G T

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:8
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:SYCWGGGRHMDTYCTS
-CSTGGGAAAD-----
 A T G C G A C T A G T C C G A T C T A G A C T G C T A G T C G A G T A C G T A C C G A T C G A T A G C T A G T C G A C T A T C G
A C G T A G T C T A C G C G A T A C T G C T A G A C T G C G T A C T G A G T C A C T G A A C G T A C G T A C G T A C G T A C G T

RELA/MA0107.1/Jaspar

Match Rank:9
Score:0.57
Offset:4
Orientation:forward strand
Alignment:SYCWGGGRHMDTYCTS
----GGGAATTTCC--
 A T G C G A C T A G T C C G A T C T A G A C T G C T A G T C G A G T A C G T A C C G A T C G A T A G C T A G T C G A C T A T C G
A C G T A C G T A C G T A C G T A T C G A C T G A C T G C T G A T C G A C G A T A C G T A G C T A G T C A G T C A C G T A C G T

INSM1/MA0155.1/Jaspar

Match Rank:10
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-SYCWGGGRHMDTYCTS
TGTCAGGGGGCG-----
 A C G T A T G C G A C T A G T C C G A T C T A G A C T G C T A G T C G A G T A C G T A C C G A T C G A T A G C T A G T C G A C T A T C G
C A G T A C T G A G C T G T A C C G T A A C T G A T C G A C T G A C T G A C T G G A T C C T A G A C G T A C G T A C G T A C G T A C G T